Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03031 ATGGCGGCTCTGTCCCATTCTGATTCTACAAGAATGTATTCATGGTGGTGGGACAGCCACATTAGCCCCAAGAACTCAAAATGGCTCCAAGAAAATCTGACAGATATGGATGCCAAGGTGAAGCAAATGATCAAGCTTATTGAAGAAGATGCAGATTCCTTTGCCAGGAGGGCAGAAATGTATTATAAGAAACGCCCAGAGCTTATGAAATTGGTTGAAGAGTTTTACCGGGCATACCGAGCATTGGCTGAGAGATATGATCACGCAACCGGAGTGATACGCCAGGCTCATCATACCATGGCTGAAGCATTTCCTAATCAAGTCCCCCCTGTAGCAGCAGATGATTTAACTGCAGTTTCTTCCATGGAGACTGAGCTGCATACACCAGAGAAACTGCGCCATTCACATGCATTTCTTGACTCAGATGAATTGCATAAGGATGCTTCTACTCCTTTCCATGCTATCAAAAGAAATGGACCTTATACTGATGAACCTGATTCTGCTATAAGCAGAAAGGGTTTGAAACAGCTCAATGATCTCTTCATGTCAGGGGAACCAGTAAGTCATGCAAGGTTGGCAGAAGGGCGTGCTAGAAGGGGGCTTAATTTTCTTGACACGGAGGAGATTAACGGGCTAAACAATGGAAGCCATGATACTGGGGTTCAAGTCTTACCTGACTCTGAACGGATGACCAAAGCTGAGACAGAAATTTTGGCCTTAAAGAAAGCCCTTGCCAAATTAGAAAGTGAAAAGGAAGCTGGCTTGCTTCAGTACCAGCAGAGTTTGGAGAGATTGTCAAATCTGGAATCTGAAATGTCTCGTACAAGAGAGAATTCTCAAGGACTTGATGAACGATCAGGCAAAGCTGAAGCTGAAGTTCAAACCTTGAAGGAAGCCCTTGCAAAATTACAGGCTGAAAGAGAAGCTAGTCTTCTTCAGTACCAGCAGTGTTTGGAGAAAATAGATAATCTGGACAGAAGTATTTCTTCTGCTCAAAAGGATATAGGAGAACTTAATGAACGAGCTACTAGAGCTGAAACTGAAGCTGAATCCTTAAAGCAAGACCTTGCTAGAGTAGAAGCTCAAAAGGAAGCTGCCCTTTTACATTATAACCAGTCCTTGGAGACATTGTCAAAGCTGGAGGAGAGATTAGTACAAGCTGAGGAGAATGCAAGGAGAATTAATGAGCAAGCTAATATAGCTAAAAATAAAATTGAGGAGATGAAGTTAGAAATTGGTAAACTTACTGAAGAGAAGGAAGATGCGGCTCTTCGTTATCAGCAATGCTTGGAGATAATTTCCAGTTTGGAGCACAAACTCTCTTGTGCGCAAGAGGAGGTACATAAGCTAAATTGCAAGATAAAGGATGGGGTTGAAAAGTTACATGGTTCTGAACAGAAGTGTCTTCTCTTGGAAACATCAAATCAGACTCTGCAATCTGAATTGCAGTCTTTGGCACAGAAGATGGGGTCTCAAAGTGAAGAACTCAGTGAGAAGCAGAAGGAATTGAGTAGACTTTGGACTTGCATACAAGAGGAGCGGTTGCGATTCATTGAGGCTGAAACTGCTTTCCAAACTCTTCAGAATTTGCATTCTCAATCTCAGGAAGAGCTTAGATCTCTTGCTGCTGAGCTTCATAATAAGGCTGAAATTCTGGAGAATATGGAATCCCATAAGCAGGCTTTAGAGGATGAAGTACACAAAGCCAAGGAGGAAAACCAAATTCTAAATGAGCTCAAATTATCTTCATCTTTGTCTATAAAAAATTTGCAGGATGAGGTATTAAATCTGAGGGAGACAATAAAGAAACTTGAATTGGAGGTTGGACTGCGAGTAGATGAAAGAAATGCTCTTCAGCAGGAAATTTACTGTCTTAAAGAGGAGCTTAATGATGTGAATAGAAGACATGAATCCATGATGGATGAGGTCAGATCAACTGGCTTAGACCCGCAATGCTTTGCCTTATCTGTGGAGAAATTGCAAGATGAGAACTCAAAGCTGAAGGAAACATGCAAGGCTGACGAAGGTGAGAAAGCAACTCTAAAGGAAAAACTGGAGATCATGGAGAAGCTTCTGGAGAAAAATGCAGTTTTGGAGAATTCCCTTTTAGATTTGAATGCTGAACTGGAGAGTGTCAGAGGAAAGGTAAAGGTATTGGAAGAAATTTGTGAATCTTTGCTTGTGGAGAAATCCACTCTTGCTGCTGAGAAAGCCACCTTCTTTTTTCAGTTGCAAAACACAGCTGAAAAGCTGGAGAAGCTCACCGAAAAAAACCACCTTATAGAAAATTCACTATTTGATGTGAATGCTGAGCTTGAAGGATTAAGGGTTAAGTCAAAGATTTTGGAAGACTCTTGCCTGTTGCTTGACCATGAGAATTCCAGTCTCACCTCTGAGAAAGAAACCTTAGATTCACAATTGAACATCACTCATCAAACACTGAAACATCTTGAGAAACAACACAGTGAATTGGAACTACAGCATTTGGAACTAAATGCAGAAAGGGAGTCTGCACTTCAAAAGGTGGAAGAGCTACTGGTTTCCTTATATGCTGAGAGGGAAGAGCATTCCAGGATTGTGCAATTGAATGAAGGTTACTTGGCTGAGAAGGAATCACAAATTTATATTCTACAAGAAGATGCAAATTATCAGAAAAAGGAATACAAGGAGGAACTGGACAGAGCTGTACATGCTCAAATAGAAATTTTCATCTTGCAGAAATGTATCCGGGATTTGGAGCAAAAGAACTTCTCCCTTCTCGTTGAGTGTCAGAGACTCTTGGAGGCATCCCAAATGTCTGATAGATTGATATCTAAATTGGAGAATGACAATGTTCAAAAGCAAGTTGATGCAAATTCATTGTCTGAGAAAAATAAAATGCTAAGGATTGGGCTGATTCAGGTGTTAAAGACTTTTAACATTAACAACAAGCATTGGTGTGAAGATATAATTGAAGAAGACATGGAGCTTCTGAACCTTATACACGGCAAACTTCAGGAGACACAGAATTCTTTTGTCACAGTTTTTGATGAAAGCCAGCAAGTAGCCATTGAGAACTCAATTCTTGTTGCATGCCTTGGGCAGTTGAAATTAAAGGCTGAAGATCTTGTAACCGAAAGAGATGCCCTTAATGAGCAGTTGAGTACCCAGTCTAAGCAGTTCTTGGCATCGCAAGCAGAGGTCAAAAAGATACTGGAGAAGAATCAGGAATCGAAGTTGAACATAAGCAAGGGAGAAGAGAAAATGGGAGCAATGAGAACTGAAATAGAGAATCTATGCAAACAGTTGTCAGACTTGGAAGAGGCTTACAGAAACATACGGGAAGAAAATTACAAAACATTTGAAGAGAAAAATTCCTTGATGAGAATACTTCAAGACCTGGGTGAAGAAAAAAGTAACTTGGAAGAAGAAATCAGCATCATGATTCATGAGACAATAGCTCAATCTAATATTTCTCTGATGTACCAGAACATTGTCTTTGAAAAACTCCAGGCACTTAAAGAGCTAAGCAAAGATCTTGATGAACTTTTTTCAGTAAATACCGACCTTGAGGAGAGATTAAAAATAATGATGGGCAAATTAGAAGATATGCAAATGGAAAACTCATATCTTAAGGAGTCATTTGTAGTGTCGAACATTGAACTAAAATTAGTTGAATCTGTCAATGATCAATTAAATTGTCAGATTAGCAATGGAAAGGAATTGTTGTCTCAAAAGGAAAATGAGATTTTGGAAGCGGCAGAGATGTTGAGTGCTTTATGTGATGAGAAAACAGAATTGAAAAGATTGGTGGAAGATCTGAAGAGCAAGTATGATGAGGCTAGGATGATATTTGAAGACCAGGCTAGTCAAATTTTAAAATTATCCTCAGACAAGTATCGTCAAAATGAAGAGCTTGGATCCCTTCGTGAAGTGAATCAGAAGTTGGAGGCTGAAATGAGGCACCTTCATCAAGAACTTGGAGAGACTAAACTGAGGGAAGAGAAGCTAAGTTATGAATTACTTAAGGGAACAAATGAGATTGAAAAATGGGAATCTCAGGCTGCCACACTCTATACTGGACTGCAGGTTTCTGCTGTCAATGAGACATTACTTGAAGGGAAGGTCCATGAGCTAGCTGATGCATGTGAGGATCTTGAATGCAAAAGCAGCTCCAAAGGTATGGAAAGTGAAAAGCTGAAAGAAAGAGTTAACAAGCTGGAAGGTGAAAACAGGAGACTACATGGTCAGTTGGCTGCTTATGTCCCTGCTGTCAGTGCTTTGAATGATTGTATAACATCCTTGGAGATGCAGACGCTTGTACATGCAAAACCTCATTACTACAAAGAATCAAAGATCAAAAATTTGGCGAATCACAAATACGCTGAAGGTGGTCCACAAACAGGCGAAGATCAAAATTCTACGGCAACAGAGGCACTTCCACACTTCCAAGACCTGCAGAAAAGGATCAATGCAATTGCAATGGCTGTTAAACAGATGAATGAAAGTTTCAACTCTAAAGATGAAATGAGAGAGATTCAAGTGTTAAAATCTGGAATCAGCTGGCGACAAGGAAATGTTCAAGCAAGTAAGCATCTTACTCAAATGGATGAAGCAAAGGAGCATCAGGGTGGACCTGCCGGTGAACAGAAGACAAGAAAATCAGTGTCAGATATTCCAGTAGCAGAAATTGAAGTTCTGCCAAAAGACATCATGCTTGATCAAACTACTGAATGTTCATCATATGGGATAAGTAGGAGAGGAACTCTTGAGTCTGATGATCAGATGCTTGAATTGTGGGAAACTGCTGATAAGGATGGCATTATTGGCCTGACAGTTGGCAAGGCACAGAACAAGGCCACTGCACCACCTACTGGATACCACCAAAGGAGAGCAACCAAGGAACCCAAAAACAAATATCCTTCAGTAGAGTCCTTGATTGAAAAGGAGTTGAGTGTGGACAAATTGGAGATCTCAAGAAGATTGACACAGCCACAGACAAAGCCACATGAAGAAGGCAACAAGAGGAAGATTTTAGAAAGGCTTGATTCTGATGCCCAAAAGTTGACGAACCTTGAAATCACCATACAAGATTTGATGAACAGGATGGAAATTATCGAGTATAGCACAAAGGGGAAAGGTATTGAGTATGATACCGTGAAAGGACAGCTTGAAGCTGCTCAGGAGACTGTCACAAAGTTGTTTGATGCCAACCGAAAGTTGATGAAGAATGTAGAAGAGGGTACCTCATCCTTTGCTGGGAAGTCTATAACAGAGTCAGATGAGAGTGGAGGAAGTGTCAGCAGAAGGAGAGTTTCAGAACAGGCTCGAAGAGGGTCTGAAAAAATAGGACGGCTGCAGTTGGAGGTGCAAAGACTGCAATTTTTACTTCTAAAATTGAATGATGATAAAGAAGGCAAAGGAAAAGCAATGCTTGATGATCAAAATCAAAGAGTCCTTTTGCGAGATTATCTCTATGGTGGGACGAGAAAGTACTACCAGAAGAAGAAGAAGAAAGCACCCTTTTGTGGATGTATGCAGCCTCCCACAAGGGGAGATTGA 5541 0.4061 MAALSHSDSTRMYSWWWDSHISPKNSKWLQENLTDMDAKVKQMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATGVIRQAHHTMAEAFPNQVPPVAADDLTAVSSMETELHTPEKLRHSHAFLDSDELHKDASTPFHAIKRNGPYTDEPDSAISRKGLKQLNDLFMSGEPVSHARLAEGRARRGLNFLDTEEINGLNNGSHDTGVQVLPDSERMTKAETEILALKKALAKLESEKEAGLLQYQQSLERLSNLESEMSRTRENSQGLDERSGKAEAEVQTLKEALAKLQAEREASLLQYQQCLEKIDNLDRSISSAQKDIGELNERATRAETEAESLKQDLARVEAQKEAALLHYNQSLETLSKLEERLVQAEENARRINEQANIAKNKIEEMKLEIGKLTEEKEDAALRYQQCLEIISSLEHKLSCAQEEVHKLNCKIKDGVEKLHGSEQKCLLLETSNQTLQSELQSLAQKMGSQSEELSEKQKELSRLWTCIQEERLRFIEAETAFQTLQNLHSQSQEELRSLAAELHNKAEILENMESHKQALEDEVHKAKEENQILNELKLSSSLSIKNLQDEVLNLRETIKKLELEVGLRVDERNALQQEIYCLKEELNDVNRRHESMMDEVRSTGLDPQCFALSVEKLQDENSKLKETCKADEGEKATLKEKLEIMEKLLEKNAVLENSLLDLNAELESVRGKVKVLEEICESLLVEKSTLAAEKATFFFQLQNTAEKLEKLTEKNHLIENSLFDVNAELEGLRVKSKILEDSCLLLDHENSSLTSEKETLDSQLNITHQTLKHLEKQHSELELQHLELNAERESALQKVEELLVSLYAEREEHSRIVQLNEGYLAEKESQIYILQEDANYQKKEYKEELDRAVHAQIEIFILQKCIRDLEQKNFSLLVECQRLLEASQMSDRLISKLENDNVQKQVDANSLSEKNKMLRIGLIQVLKTFNINNKHWCEDIIEEDMELLNLIHGKLQETQNSFVTVFDESQQVAIENSILVACLGQLKLKAEDLVTERDALNEQLSTQSKQFLASQAEVKKILEKNQESKLNISKGEEKMGAMRTEIENLCKQLSDLEEAYRNIREENYKTFEEKNSLMRILQDLGEEKSNLEEEISIMIHETIAQSNISLMYQNIVFEKLQALKELSKDLDELFSVNTDLEERLKIMMGKLEDMQMENSYLKESFVVSNIELKLVESVNDQLNCQISNGKELLSQKENEILEAAEMLSALCDEKTELKRLVEDLKSKYDEARMIFEDQASQILKLSSDKYRQNEELGSLREVNQKLEAEMRHLHQELGETKLREEKLSYELLKGTNEIEKWESQAATLYTGLQVSAVNETLLEGKVHELADACEDLECKSSSKGMESEKLKERVNKLEGENRRLHGQLAAYVPAVSALNDCITSLEMQTLVHAKPHYYKESKIKNLANHKYAEGGPQTGEDQNSTATEALPHFQDLQKRINAIAMAVKQMNESFNSKDEMREIQVLKSGISWRQGNVQASKHLTQMDEAKEHQGGPAGEQKTRKSVSDIPVAEIEVLPKDIMLDQTTECSSYGISRRGTLESDDQMLELWETADKDGIIGLTVGKAQNKATAPPTGYHQRRATKEPKNKYPSVESLIEKELSVDKLEISRRLTQPQTKPHEEGNKRKILERLDSDAQKLTNLEITIQDLMNRMEIIEYSTKGKGIEYDTVKGQLEAAQETVTKLFDANRKLMKNVEEGTSSFAGKSITESDESGGSVSRRRVSEQARRGSEKIGRLQLEVQRLQFLLLKLNDDKEGKGKAMLDDQNQRVLLRDYLYGGTRKYYQKKKKKAPFCGCMQPPTRGD* 1847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03031 1846 Coils Coil 1082 1109 - -
Rops8g03031 1846 Coils Coil 1166 1200 - -
Rops8g03031 1846 Coils Coil 657 722 - -
Rops8g03031 1846 Coils Coil 1117 1144 - -
Rops8g03031 1846 Coils Coil 258 425 - -
Rops8g03031 1846 Coils Coil 1026 1053 - -
Rops8g03031 1846 MobiDBLite consensus disorder prediction 1527 1549 - -
Rops8g03031 1846 MobiDBLite consensus disorder prediction 267 290 - -
Rops8g03031 1846 Coils Coil 1222 1277 - -
Rops8g03031 1846 MobiDBLite consensus disorder prediction 1611 1634 - -
Rops8g03031 1846 Coils Coil 1717 1737 - -
Rops8g03031 1846 SUPERFAMILY Tropomyosin 239 463 - -
Rops8g03031 1846 Coils Coil 587 607 - -
Rops8g03031 1846 Coils Coil 937 957 - -
Rops8g03031 1846 Coils Coil 800 841 - -
Rops8g03031 1846 Coils Coil 230 250 - -
Rops8g03031 1846 Coils Coil 615 646 - -
Rops8g03031 1846 MobiDBLite consensus disorder prediction 1745 1771 - -
Rops8g03031 1846 Coils Coil 744 764 - -
Rops8g03031 1846 Coils Coil 1675 1695 - -
Rops8g03031 1846 Gene3D - 229 399 - -
Rops8g03031 1846 MobiDBLite consensus disorder prediction 1757 1771 - -
Rops8g03031 1846 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Rops8g03031 1846 Coils Coil 1292 1326 - -
Rops8g03031 1846 Coils Coil 433 453 - -
Rops8g03031 1846 Coils Coil 1390 1410 - -
Rops8g03031 1846 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Rops8g03031 1846 MobiDBLite consensus disorder prediction 1527 1541 - -
Rops8g03031 1846 MobiDBLite consensus disorder prediction 276 290 - -
Rops8g03031 1846 Coils Coil 475 502 - -
Rops8g03031 1846 PANTHER PROTEIN NETWORKED 4A 284 391 - -
Rops8g03031 1846 Coils Coil 524 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03031 Rops-Chr8 67377023 67384798 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03031 - - gmx:100810726 2800.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03031 8 67377023 67384798 Rops8g03031 8 67377023 67384798 ECH
Rops8g03031 8 67377023 67384798 Rops6g01330 6 28722951 28731313 PCT