Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01330 ATGGCAACTCTGTCTCATGCAGATTCTAGGAGAATGTATTCATGGTGGTGGGATAGCCACATAAGCCCCAAGAACTCAAAATGGCTCCAAGAAAATCTGACAGATATGGATGCCAAGGTGAAGCAAATGATTAAGGTTATTGAAGAAGATGCAGATTCCTTTGCCAGAAGAGCAGAAATGTATTATAAAAAACGCCCTGAGCTTATGAAATTGGTTGAAGAGTTTTACCGGGCATACCGGGCATTGGCTGAGAGATATGATCATGCAACTGGAGTGATCCGTCATGCCCATCGGACCATGGCTGAAGCATTTCCTAATCAAATCCCTATGATGCTGACTGATGATTTGCCTGCAGTTTCTCCAGCAGAGACTGAGCCACGTACTCCAGAAACGCACCACCCTTCACGTGCATTTCTTGACCCAGATGAATCACAAAAGGATGCTTCTGCTCATTTCCATGCTATTAAAAGAAATGGAGCTTATGGTGAAGAACCTAATTCCGCTTTGAACAAAACAGGTTTAAAACAGCTCAATGATCTCTTCGTCCCTGGAGAACATGTAAAGTTTGCAGAAGGGCATGCTAGAAGGGGGCTCAATTTTCTTGAGAAACAAGAGGAGAGTAATGAGCAAAACAATGGAAGCCATGATGCTAGGGCTCAAGTCTTGTCTGAGTCTGAACGCGTGACAAAAGCCGAGATAGAAATTTTGGCCTTAAAGAAAGCACTTTCCAAGTTAGAAGGTGAAAAGGAAGCTGGCTTGCTTCAGTATCAGCAGAGTCTGGAGAGATTGTCTAATCTTGAGTTAGAGGTGTCTCGTGCACAAGAGAATTCTCAAAGACTTGATGAACGAGCAAGTAAAGCAGAAGCTGAAGTTCACGCCTTGAAGGAAGACCTAATCAAACTACAGGCTGAAAGGGAAGCTAGTCTTCTTCAGTACCAGGAATGCTTAGAGAAAATATCTAATCTGGAGAAAGATATTTCTTTTGCTCAGAAGGATGCAGGGGAACTTAATGAACAAGCAACTAGAGCAGAAACTGAAGCTGAGTCCCTAAAGCGGGACCTTGCTAGAGCAGAAGCTGAAAAGGAAGCTGCCCTTGTTCAATATAACCAGTGCTTGGAGACATTATCAAAACTGGAGGAGAGATTGAAAGAAGCTGAAGAGAATGCTAGAAGGATTCATGAGCAAGCTAATATAGCTGAAAATGAAATCAAGGCTTTGAAGTTGGAAATTACTAAACTCAATGAAGAGAAGGAAGATGCTGCTATCCGTTGTCAGCAATGCTTGGAGATAATTTCCAGTTTGGAGCATAAACTCTCTTGTTCTGAAGAGGAGGTGCATATGCTAAATTCCAAGATACATGATGAGGTTGAAAAGTTACGTAGTTCTGAACAGAAGTGCCTTCTTTTGGAAACATCAAATCACACTCTGCAGTCTGAATTACAGTCTTTGGCACAAAAGATGGGGTCTCAAAGTGAAGAACTTAGTGAGAAGCAGCAGGAATTGGGTAGACTTTGGAGTTGCATACAAGAGGAGAGATTGCGTTTCATTGAGGCTGAAACTGCTTTCCAAACTCTTCAGGATTTGCATTCTAAATCCCAGGAAGACCTCGGATCTCTTGCTGCTGACCTTCACAGTAAAGTGGAAATACTGGGAAATGTGGAAGCATGCAAGCAGGCTTTAGAGAATGAAGTACACAGGGTCCATGAGGAAAACAAAATTCTAAATGAAGTCAAAATTTCTTCATCTTTGTCTATACAAAATTTGCAGGATGAGATATTGAATTTGAAGGAGACAATAGAGAAACTTGAACAGGAGGTTGATTTGCGACTTGATGAAAGAAATGCTCTTCAGCAAGAAATTTACTGTCTTAAAGAGGAGCTTAATGATTTGAATAAAAAACATGAAACTATGATGGAGGAGATCAGGTCAACTGACTTAGACCCACAATGCTTTGGCTTATCTGTGAAAAAATTGCAAGATGAAAACTCAAAGCTGAAGGAGACATGTGAGGCTGACAAAGATGAGAAAGCAGCTCTTCTGGTAAAATTGGAAACCATGGGGAAACTTACGGAAAAAAATTCTCTTTTAGAGAATTCCCTTTCAGACTTGAATGCTGAGCTGGATAGCGTCAGAGGAAAGGTAAATTTCTTGGAAGAAACATGCCAATCTCTACTTATGGAGAAATCAACTCTTGCTGCTGAGAAGGCCACCTTGTTTTCTCAGTTACAAGCCACAACTGAAAACCTGGAGAAGCTCTCAGAAAAGAACAACCTTTTGGAAAACTCACTATTTGATGTGAATGCTGAGCTTGAAGGATTGAGGGCAAAGTCCAAGATCTTAGAAGACCAATGTCAGTTACTTGACCATGAGAAGTCCAGTATCTTTTCCGAGAAAGAAACCTTAGTTTCACAGTTGAACATCACTAATCAAACACTGAAAGATCTTGAGAAACAACACAGTGAATTGGAACTAAAGCATTTAGAGCTAAAAGGAGAAAGGGAGTCTGCGCTTCAAAAGGTAGAAGAGCTACTGGTTTCCCTATATTCTGAGAGGGAAGAGCATTGCAGGGTTGTGAAGTTGAATGAAGATGAATTGTTGAAGAAGGAATTACAAATTCATATTCTACAAGAAGATGCAAATTGCCAGAAAAAGGAGTATGAGGAGGAACTGGACAGAGCTATACATGCTCAAATCCAAATTTTCATCCTGCAGAAATGTATCCATGATTTGGAGAAAAAGAACTTCTCCCTTCTAGTTGAGTGTCAGAGACTTTTGGAGGCATCCAAAATGTCCGAGAGAATGATATCTAAATTGGAGACTGAAAATGCTCAAAAGCAGGTTGATGTGAATTCTTTGTCTGAGAAAATTAGAATTCTAAGGATTGGGCTGCTTCAGGTGTTGAAGACTCTTGACGTTAACAGCGAGCATGTCTTTGAAGATATGCTTGAAGAAGACCAGGTTCTTCTGAACCATATACATGGAAAACTTCGGGAGAAACAGAAGTCCTTTGACACAATTTTTGATGAAAGCCAGCACATGGTCATTGAGAATTCAGTTCTGATTGCAGTCCTTGGACAGTTGAAACTAAAGGTGGAAAATCTTATGACAGAAAGAGGTGCCCTTGATAAGGAGTTCAGGATACAGTCTAAGCAGTTCTTGGCATTGCAAATAGAGGCCCACAAGATATTGGAGAAGAATCAGGAGTTGAAGTTGACAACAAGCAAAGGAGAAGAGAGAATGGAAGTAATGACGACTGAAATTGACAGTCTACGCAAACAGCTATCAGACGTGGAAAAGAGTCACAACAACTTACAGGAAGAAAGGTGCATGATATTTGAAGAGAAAAAGTCCTTGATGAGAAGTTTTCTAGATTTGGGTGAAGAGAAGAATAACTTAGAAGAAGAAATTTGTGCCGTGATCCACAAGACAATAGTTCAATCTAATATTTCTGTGATTTATCAGAATATCCTCTTTGAAAAACTCCTGGAACTTAAAGAGCTAGGTGAAGATCTTGATAAACTTTGTTTAGTAAATAATGACCTTGAGGAGAGATTAAAGATAATGGGGTGCAAATTAGAAAGTGCAGAGATGGAAAACTCACATCTTAAAGAGTCATTTGTAAAGTCGAATGTTGAAATAAATTTAGTTGAATCTGTCAATGATCATTTGAGTTGTCAGATTAGGAATGAAAGGGAAATGTTGTGTCAAAAGGAAAATGAGCTTTTGGAAACAGCCAATATGTATTGTGCTTTACACACTGAGAAAACAGAATTGCAAAGAATGGTGGAAGATCTGAAGATTAAGTATGATGAGACAAGGGGGGTACTTGACGAACAGGCTAATCAAATTTTCAAATTGTCCTCAGACAATGATCGTCAAAATGAAGAGCTTGGATGCCTTGTTGAAGCGAATCAGAAGTTGGAAACTGAAATGAAGCACCTGCATCAAGAACTTGGAGAAACTAAACTGAGGGAAAAGAATTTAAGTTATGAAGTACATAAGGGAATAAATGAGATTGAACAATGGGAATCTCAGGCTTCAACACTCTATGGCGAACTGCAGATTTCTGCTGTCAATGAAACATTATTTGAAGGGAAGGTCTGTGAGCTAGCTGATACATGTGAGAATCTGGAACGCAAAAACTACTCTAGAGACAAGGAAAGTGAACAGCTGAAAGAAAGAGTTAGCAAGTTGGAAGGTGAAAATGGAAGACTGTGTGATCAACTAGCTGCTTATGTTCCAGCTGTCAGTGCTTTGAATGATTGCATAACATCTCTGGAGATGCAGACACTTGCACATGCAAAACCTCATGACTATGAAGAATCAAAGGTTAAAAATTTGGTGAATCAGCAAGACGCTGAAAATGGTCAACAAACAGGTGAAGATCATCAGACTGTTATGGCACTAGATGCGCTCCCTGACTTACAAGAATTGCAGAGAAGGATCAATGCAATTGCAGTGGCAGTTAAGCAGTTAAATGGAAGTTTCAAACCCAAGGATGATATGAGAGAGATTCAAGAGTTAAAATCTGGAATTAGCTGGCATCAAGAGAATATTCAAGCAAGCAAGCATGTTGCTCACGTGGATGAAGCAAAGGAGCACCGGGGTGGGCCTGTAACAGAGATTGAAGTTCTGCCAAAAGACATCATGCTTGATCAAATGTCTGAATGTTCATCATATGGGCCGAGTAGGATAGGAACTCTTGAGGCTAATGATCAGATGCTTGAATTGTGGGAAACAGCCGATAAGGATGGCATTATTGACCGGAAGGTTGACAAGACACAGAAGATGGCAGCGGGACCAGATCATCAAAGAGGAGCAACCAACGAACCCAAAAGCAAATATCCTTCAGAAGAATCCTTGGAGGAGAAGGAGTTGAGTGTGGACAAATTAGAGATCTCAAGAAGGTTGACACTGCCACGTGAAGAAGGCAACAAGAGCAAGATTCTAGAAAGACTTGATTCTGATGCACAGAAGCTAACAAACCTTCAAATAACCATACAAGACTTGAAGAAGAAGGTGGAAGTTACTGAGAAGAGTGGAAAGGGAAAAGCTGGTGAGTATGATACGGTGAAAGGACAACTTGAAGCTGCTCAGGAGACCATCACAAAGTTGTTTGATGCCAACCGCAAGCTGATGAAGAATGTAGAAGAGGGTTCGTTGTCTTCTGTTGGGAAGGCTGCAGCAGAGTCAGATGATAGTGGAAGTGTCAGCATAAGTAGAGTTTCAGAACAGGCAAGGAGAGGGTCAGAAAAAATAGGACAACTTCAGTTGGAGGTGCAAAGACTGCAGTTTCTGCTTCTGAAACTGGATGATGGAAAAGAAAGCAAAGAGAAAACTAGAATGGCTGATCGAAGTCCTAGAGTACTTTTGCGGGATTATCTCTCTGGTGGGACGAGAACCAACTACCTAAAGAAGAAGAAGAAAGCACCATTTTGTGCATGTGTGCAACCTTCCACCAAGGGAGATTGA 5472 0.4061 MATLSHADSRRMYSWWWDSHISPKNSKWLQENLTDMDAKVKQMIKVIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATGVIRHAHRTMAEAFPNQIPMMLTDDLPAVSPAETEPRTPETHHPSRAFLDPDESQKDASAHFHAIKRNGAYGEEPNSALNKTGLKQLNDLFVPGEHVKFAEGHARRGLNFLEKQEESNEQNNGSHDARAQVLSESERVTKAEIEILALKKALSKLEGEKEAGLLQYQQSLERLSNLELEVSRAQENSQRLDERASKAEAEVHALKEDLIKLQAEREASLLQYQECLEKISNLEKDISFAQKDAGELNEQATRAETEAESLKRDLARAEAEKEAALVQYNQCLETLSKLEERLKEAEENARRIHEQANIAENEIKALKLEITKLNEEKEDAAIRCQQCLEIISSLEHKLSCSEEEVHMLNSKIHDEVEKLRSSEQKCLLLETSNHTLQSELQSLAQKMGSQSEELSEKQQELGRLWSCIQEERLRFIEAETAFQTLQDLHSKSQEDLGSLAADLHSKVEILGNVEACKQALENEVHRVHEENKILNEVKISSSLSIQNLQDEILNLKETIEKLEQEVDLRLDERNALQQEIYCLKEELNDLNKKHETMMEEIRSTDLDPQCFGLSVKKLQDENSKLKETCEADKDEKAALLVKLETMGKLTEKNSLLENSLSDLNAELDSVRGKVNFLEETCQSLLMEKSTLAAEKATLFSQLQATTENLEKLSEKNNLLENSLFDVNAELEGLRAKSKILEDQCQLLDHEKSSIFSEKETLVSQLNITNQTLKDLEKQHSELELKHLELKGERESALQKVEELLVSLYSEREEHCRVVKLNEDELLKKELQIHILQEDANCQKKEYEEELDRAIHAQIQIFILQKCIHDLEKKNFSLLVECQRLLEASKMSERMISKLETENAQKQVDVNSLSEKIRILRIGLLQVLKTLDVNSEHVFEDMLEEDQVLLNHIHGKLREKQKSFDTIFDESQHMVIENSVLIAVLGQLKLKVENLMTERGALDKEFRIQSKQFLALQIEAHKILEKNQELKLTTSKGEERMEVMTTEIDSLRKQLSDVEKSHNNLQEERCMIFEEKKSLMRSFLDLGEEKNNLEEEICAVIHKTIVQSNISVIYQNILFEKLLELKELGEDLDKLCLVNNDLEERLKIMGCKLESAEMENSHLKESFVKSNVEINLVESVNDHLSCQIRNEREMLCQKENELLETANMYCALHTEKTELQRMVEDLKIKYDETRGVLDEQANQIFKLSSDNDRQNEELGCLVEANQKLETEMKHLHQELGETKLREKNLSYEVHKGINEIEQWESQASTLYGELQISAVNETLFEGKVCELADTCENLERKNYSRDKESEQLKERVSKLEGENGRLCDQLAAYVPAVSALNDCITSLEMQTLAHAKPHDYEESKVKNLVNQQDAENGQQTGEDHQTVMALDALPDLQELQRRINAIAVAVKQLNGSFKPKDDMREIQELKSGISWHQENIQASKHVAHVDEAKEHRGGPVTEIEVLPKDIMLDQMSECSSYGPSRIGTLEANDQMLELWETADKDGIIDRKVDKTQKMAAGPDHQRGATNEPKSKYPSEESLEEKELSVDKLEISRRLTLPREEGNKSKILERLDSDAQKLTNLQITIQDLKKKVEVTEKSGKGKAGEYDTVKGQLEAAQETITKLFDANRKLMKNVEEGSLSSVGKAAAESDDSGSVSISRVSEQARRGSEKIGQLQLEVQRLQFLLLKLDDGKESKEKTRMADRSPRVLLRDYLSGGTRTNYLKKKKKAPFCACVQPSTKGD* 1824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01330 1823 Coils Coil 1115 1135 - -
Rops6g01330 1823 Coils Coil 431 451 - -
Rops6g01330 1823 PANTHER PROTEIN NETWORKED 4A 286 387 - -
Rops6g01330 1823 Coils Coil 256 304 - -
Rops6g01330 1823 Coils Coil 1695 1715 - -
Rops6g01330 1823 Coils Coil 1080 1107 - -
Rops6g01330 1823 Coils Coil 1262 1324 - -
Rops6g01330 1823 Coils Coil 585 644 - -
Rops6g01330 1823 Coils Coil 798 832 - -
Rops6g01330 1823 Coils Coil 1164 1198 - -
Rops6g01330 1823 Coils Coil 686 720 - -
Rops6g01330 1823 Coils Coil 480 500 - -
Rops6g01330 1823 Coils Coil 1653 1680 - -
Rops6g01330 1823 Coils Coil 1388 1408 - -
Rops6g01330 1823 SUPERFAMILY Tropomyosin 419 644 - -
Rops6g01330 1823 MobiDBLite consensus disorder prediction 126 148 - -
Rops6g01330 1823 Coils Coil 935 955 - -
Rops6g01330 1823 Coils Coil 557 577 - -
Rops6g01330 1823 Coils Coil 1024 1044 - -
Rops6g01330 1823 MobiDBLite consensus disorder prediction 118 148 - -
Rops6g01330 1823 Gene3D - 307 471 - -
Rops6g01330 1823 Coils Coil 312 423 - -
Rops6g01330 1823 Coils Coil 1475 1495 - -
Rops6g01330 1823 MobiDBLite consensus disorder prediction 1593 1627 - -
Rops6g01330 1823 Coils Coil 228 248 - -
Rops6g01330 1823 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Rops6g01330 1823 Coils Coil 655 675 - -
Rops6g01330 1823 Coils Coil 735 790 - -
Rops6g01330 1823 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Rops6g01330 1823 SUPERFAMILY Tropomyosin 199 418 - -
Rops6g01330 1823 Coils Coil 872 896 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01330 Rops-Chr6 28722951 28731313 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01330 - - gmx:100810726 2442.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01330 6 28722951 28731313 Rops6g01330 6 28722951 28731313 ECH
Rops8g03031 8 67377023 67384798 Rops6g01330 6 28722951 28731313 PCT