Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03021 ATGGCTGATCACAGCTCCCAACCATCTTCTCCCAATAAAAATTGTGCTAGAACTATTCATTCTCTATTTGGTTTACCAAAATTTAGAAATTTCACCAACAAGTGTCTCTCAGGAGCTGAGGCTTTGCTAAGCCCAACTTCAATTCTTGAAACCAGACCATTATCCCCTTTTGGCTTTGGAAATCCTTTCTCATATGACACCACTACCCAAACACTTCCACAAAAAACTTCATCAGAAACCAAAAGCTCCAGGGACAAGGTGGATTCAAAAGGCATTGGACTTGCTCTTGTTGGTGCTCTTAAAGATGAGCATTTTCATGAGAATTCTGTTGAACCCAACAAAGGAAATGTCCTGTTTGGAACTACTCAGCTTAAAGTGAAAATCCCACCACCCCTGCCACCTTCCACATTTTCTCCCAACAAGTCTCAAACAGGTGCTGAAGATTTTGGAGCCAAAACCAAGGATTCACAAAGTTCTGAAATTCATACAAAGGATTCCCCAAGTGCGGTTGTTCTGTCTTTGAGTGAGATGGAGCTTTCTGAGGAATATACATGCGTGATATCCCATGGACCTAATCCAAAAACCACCCATATATTCAATAATTGCATTGTGGAGAGCCACTGTTCTCTGCCCCAAAACTCTCAACCTGCTTCTGCTAACTTCCTCACCTTCTGTTACACTTGCAAGAAACATCTTGAGCACACAAATGACATTTTTATTTATAGAGGGGAGAAAGCTTTCTGCAGTCGCGAATGCCGCCACCGAGAAATGGTGTTAGATGGTGTAGAAAGTTTAGAATTTGAGAGTAATGGTGATCGTTATTGA 825 0.4145 MADHSSQPSSPNKNCARTIHSLFGLPKFRNFTNKCLSGAEALLSPTSILETRPLSPFGFGNPFSYDTTTQTLPQKTSSETKSSRDKVDSKGIGLALVGALKDEHFHENSVEPNKGNVLFGTTQLKVKIPPPLPPSTFSPNKSQTGAEDFGAKTKDSQSSEIHTKDSPSAVVLSLSEMELSEEYTCVISHGPNPKTTHIFNNCIVESHCSLPQNSQPASANFLTFCYTCKKHLEHTNDIFIYRGEKAFCSRECRHREMVLDGVESLEFESNGDRY* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03021 274 MobiDBLite consensus disorder prediction 138 152 - -
Rops8g03021 274 ProSiteProfiles Zinc finger FLZ-type profile. 220 264 IPR007650 -
Rops8g03021 274 MobiDBLite consensus disorder prediction 131 167 - -
Rops8g03021 274 MobiDBLite consensus disorder prediction 65 87 - -
Rops8g03021 274 PANTHER FCS-LIKE ZINC FINGER 8 1 263 IPR044593 -
Rops8g03021 274 Pfam zinc-finger of the FCS-type, C2-C2 216 260 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03021 Rops-Chr8 67292643 67294776 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03021 - - gmx:100788456 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03021 8 67292643 67294776 Rops8g03021 8 67292643 67294776 ECH
Rops8g03021 8 67292643 67294776 Rops6g01340 6 28881479 28883259 PCT