Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01340 ATGCTGCTTAGGAACAGATCAAGAGCAGTAACCAAGCCAAGTTTGATGGGTGATCACAGCTCTCAGCCATGTCCAAATCAGAATTACTCTAGAACTATTATCCCATCTCTATTTGGCTCACCAAAATTAAGAGATTTCACCATGAAGTGTCTCTCAGGAGCTGAGGCTTTGAGAAGTCCAACATCAATTCTTGACACAAGGGCATTATCCCCATTTGGGAATCCTTTGTCATATGACAACAGGACCGAAACTATTATTAGCTCCCCAAAAATGCACTCAGAAAAAAGCAGAAGCTCTTGGAACAAGGTAGATTCAAAAAGCATTGGCCTTGCTCTTGTGGATGCACTTAAAGATGAGCCTATTCATGAGAATTCTGCTAAACCAAACAACAGAAAAGTCCTGTTTGGAACTAAGCTTAGAGTGAAAATCCCTCCCTTGTCACCTTCCCCGTTTGAGTCTAAAACATGTGCCAAAACCAAGGATTTGCATTACTCGGGAATTTATACAAAGGATTCTCCACCAGCAGTTGCTACTGGTGTTCTGACTTTGAGTGAGATGGAGCTTTCTGAGGAGTACACATGTGTGATAAACCATGGACCTAATCCAAGAACAACCCACATATTCGATAATTGTATTGTGGAAAACTACTGTTCCCTACCCAATAACCTGTACTCTCCTTCACTGAATTTCCTTAACTTCTGTTACACTTGCAAGAAGCATCTTGAGCAGACAAAGGACATCTTTATTTACAGAGGAGAAAAAGCTTTCTGCAGTCAAGAATGTCGCCACCAAGAGATGGTGTTAGATGGAGCTGAATATTAA 822 0.4112 MLLRNRSRAVTKPSLMGDHSSQPCPNQNYSRTIIPSLFGSPKLRDFTMKCLSGAEALRSPTSILDTRALSPFGNPLSYDNRTETIISSPKMHSEKSRSSWNKVDSKSIGLALVDALKDEPIHENSAKPNNRKVLFGTKLRVKIPPLSPSPFESKTCAKTKDLHYSGIYTKDSPPAVATGVLTLSEMELSEEYTCVINHGPNPRTTHIFDNCIVENYCSLPNNLYSPSLNFLNFCYTCKKHLEQTKDIFIYRGEKAFCSQECRHQEMVLDGAEY* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01340 273 MobiDBLite consensus disorder prediction 14 28 - -
Rops6g01340 273 Pfam zinc-finger of the FCS-type, C2-C2 226 270 IPR007650 -
Rops6g01340 273 MobiDBLite consensus disorder prediction 1 28 - -
Rops6g01340 273 ProSiteProfiles Zinc finger FLZ-type profile. 229 273 IPR007650 -
Rops6g01340 273 PANTHER FCS-LIKE ZINC FINGER 8 3 272 IPR044593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01340 Rops-Chr6 28881479 28883259 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01340 - - gmx:100811607 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01340 6 28881479 28883259 Rops6g01340 6 28881479 28883259 ECH
Rops8g03021 8 67292643 67294776 Rops6g01340 6 28881479 28883259 PCT