Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02999 ATGGAGCTTAGCAAAGTGACACTAGAGATCTTTTCCAAACTGGAGCAGCAATGGCTCTTCCACTGCGAAGCCACCACCAAAACCCGCGTACTCAGCATTGACGGCGGAGGAACCACCGCCATTGTCGCCGGCGCTGCCCTCATCCACCTCGAGGACCAGATCCGCGCCCAAACTTCCGACCCTCACGCTCAAATTGCCGATTACTTCGACATCATCGCCGGAACCGGCATTGGCGCGCTTCTAGCTGCCATGATCACCGCCGACGATGGATTCGGCCGGCCTCTCTATACCGCCAGAGATTCCGTCCAAGTTATCGCCGAGAGGAATCACGAACTCTTCAAGCCGAAGTTCACAGCCGGCGTTTTTCGGCGGCGCCGGATATTCTCCTCGAAGAGCATGGAAAACGCGTTGAAGCAAATGTTTCAGAGAAAAGAAGGACAATCGTTGACTCTGAAGGACACGTGTAAACCACTTCTCATCCCTTGCTTTGACCTCAAGAGTTCGGCGCCATTCGTATTCTCCCGAGCCGACGCGTCCGAGTCACCGAGTTTCAACTTCGAGCTCTGGAAGGTGTGTCGCGCCACGTCAGCGACTCCGAGCCTCTTCAAGCCCTTCCATTTCGCCTCCGTAGACGGAAAGTCCTCGTGCTCTGCCGTGGACGGCGGTCTGGTGATGAACAACCCTGCGGCGGCTGCGGTCACTCATGTCCTCCACAACAAGCGCGATTTCCCGTCGGTAAACGGCGTGGAGGATCTTCTAGTACTGTCCATCGGAAACGGAGCGCCGGCGAAGAGAGTACGTGACATCCGTGAATGCTCCACGTCGTCGGTGGTTGACATTGCCCTCGACGGCGTTTCAGAGACCGTTGATCAGATGCTTGGGAACGCTTTCTGTTGGAACCGTACGGATTACGTCAGGATTCAGGCATTCGGTTTGGGAGGAGAAGGAACGAAGGAAGAAAACGTTCTGAATGAGAGAGTGCTGGAATCGTTACCGTTTGGTGGCAAGCGGTTACTGCAGGAAACTAATGGTAACAAAATTGAGAGCTTTGTGCAGCGTCTTGTTGCTACCGGAAAGACTAGTTTGCCACCAAGTCCCTGTAAGGTTCCGCCGTTAGCCTCTCGCTAA 1128 0.5488 MELSKVTLEIFSKLEQQWLFHCEATTKTRVLSIDGGGTTAIVAGAALIHLEDQIRAQTSDPHAQIADYFDIIAGTGIGALLAAMITADDGFGRPLYTARDSVQVIAERNHELFKPKFTAGVFRRRRIFSSKSMENALKQMFQRKEGQSLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFNFELWKVCRATSATPSLFKPFHFASVDGKSSCSAVDGGLVMNNPAAAAVTHVLHNKRDFPSVNGVEDLLVLSIGNGAPAKRVRDIRECSTSSVVDIALDGVSETVDQMLGNAFCWNRTDYVRIQAFGLGGEGTKEENVLNERVLESLPFGGKRLLQETNGNKIESFVQRLVATGKTSLPPSPCKVPPLASR* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02999 375 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
Rops8g02999 375 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Rops8g02999 375 PANTHER PATATIN-LIKE PROTEIN 6 1 368 - -
Rops8g02999 375 CDD Pat17_PNPLA8_PNPLA9_like 30 321 - -
Rops8g02999 375 Gene3D Cytosolic phospholipase A2 catalytic domain 20 362 - -
Rops8g02999 375 SUPERFAMILY FabD/lysophospholipase-like 27 334 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02999 Rops-Chr8 66914323 66915863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02999 1 373 Acyl Lipid Metabolism Gene Families AT3G63200 69.895 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02999 - - gmx:100806989 629.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02999 8 66914323 66915863 Rops8g02999 8 66914323 66915863 ECH
Rops8g02999 8 66914323 66915863 Rops6g01354 6 29017145 29018748 PCT