Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01354 ATGGAGCTAAGTAAAGTAACCTTAGAGATCTTTTCCAAACTGGAACAGAAATGGCTCTCTCACTGTAAAGACAACAACAAAACCCGCATTCTCAGCATTGACGGCGGAGGAACCACCGCCATTGTTACCGGCACTGCTCTCATCCACCTCGAAGATCAGATCCGTCTCCAAACTTCGGATCCTCATGCTCAGATATCAGATTTCTTCGAAATCGTCGCCGGTACCGGCATAGGTGCCATCCTTGCGGCGATGATCACTGCCGCGGATGCCTTTGGAAGGCCTCTCTATACTGCAAGAGAAGCCGTTCGTCTCGTTACTGACAGGAACTCTGAAATGTATAAACTCAAATCCGCCGGAGTATTTCGCCGGCGCCGGAGATTCTCTTCCAGGAGCATGGATAACGTGTTGAAGCAAGTGTTTCGCAGAAAGGAGGATGGAAGGTTGTTGACCTTAAAGGACACGTGTAAACCGTTGCTTATCCCTTGCTTTGACCTCAAGAGTTCGGCGCCATTCGTCTTTTCTCGTGCCGATGCGTCCGAATCTCCCAGCTTCAACTTCGAGCTCTGGAAAGTATGTCGCGCCACGTCAGCGACACCGAGCCATTTCAAGCCGTTTCATTTCACTTCCGTCGACGGAAAAACTTCCTGCTCCGCCGTCGACGGAGGACTCGTGATGAACAACCCTACGGCGGCGGCGGTCACGCATGTTCTCCACAACAAGCGCGATTTTCCGTCGGTGAACGGCGTTGAGGATCTATTGGTGCTTTCCTTGGGAAACGGATCGTCAAGCGCAAAATCATGCGAGAATCGCACGTGCTCCACGCCGTCGGTGGTTGACATTGTATTCGACGGTGTTTCCGAGACCATTGACCAGATGTTGGGGAACGCATTCTGTTGGAACCGTACGGACTACGTCAGAATCCAGGCGTTCGGTTTGGGAAGTGAAGCAATGAGAGGGACGGAAAAAGAGGAAGTGCTTAAAGAGAGAGGACTCGAGTCGTTACCGTTTGGCGGGAAGCGGTTACTGACGGAGACTAACGGTAACAGAATCGAAAGCTTCGTGCAACGTCTTGTTGCTACCGGAAAACCCAGCCCGCCGTCTAGTCCCTGCAAGGTTTCTGCCGTTAACGGCCGCTAG 1137 0.5215 MELSKVTLEIFSKLEQKWLSHCKDNNKTRILSIDGGGTTAIVTGTALIHLEDQIRLQTSDPHAQISDFFEIVAGTGIGAILAAMITAADAFGRPLYTAREAVRLVTDRNSEMYKLKSAGVFRRRRRFSSRSMDNVLKQVFRRKEDGRLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFNFELWKVCRATSATPSHFKPFHFTSVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGSSSAKSCENRTCSTPSVVDIVFDGVSETIDQMLGNAFCWNRTDYVRIQAFGLGSEAMRGTEKEEVLKERGLESLPFGGKRLLTETNGNRIESFVQRLVATGKPSPPSSPCKVSAVNGR* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01354 378 Gene3D Cytosolic phospholipase A2 catalytic domain 17 363 - -
Rops6g01354 378 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Rops6g01354 378 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
Rops6g01354 378 MobiDBLite consensus disorder prediction 358 378 - -
Rops6g01354 378 PANTHER PATATIN-LIKE PROTEIN 6 1 362 - -
Rops6g01354 378 CDD Pat17_PNPLA8_PNPLA9_like 30 334 - -
Rops6g01354 378 SUPERFAMILY FabD/lysophospholipase-like 26 311 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01354 Rops-Chr6 29017145 29018748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01354 1 376 Acyl Lipid Metabolism Gene Families AT3G63200 71.990 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01354 - - gmx:100777557 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01354 6 29017145 29018748 Rops6g01354 6 29017145 29018748 ECH
Rops8g02999 8 66914323 66915863 Rops6g01354 6 29017145 29018748 PCT