Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02987 ATGGAATCAACTCATGTAATATCCATTACTAACGGAGAAGATAATATTGCTCATATGAAGGAAGAAAAAGCACTCCAATTTCCAATTCCACCTCTTGTCTCTCCTCTTGAGAAAAATGAAATCCACTTCACTCTTGTCCCCACCACTTCCTATCTCAAGGACAAGCAGCTGAAAACTGATCATGACACTAGGAAGATAATCCACAGTATCAAAGTAGGAATCTCTTTGGTTTTGGTTTCACTCCTGTACATTTTGAATCCTCTGTTTGAGCAAGTTAGAGAAAATGCAATGTGGGCTATCATGACTGTTATCGTCATCTTTGAATTCTCAGCAGGAGCCACACTAGGAAAGGGCTTCAATCGTGGAATCGGAACTATTCTAGGAGGAGGAGTGGGTTGTTTAACAGCAGTTTTTGCCCAAAGCATTGGTGGGGTTGGCAACTCGATTATCATTGGTATTTCAGTATTTATCTTTGGATCAGTTGCTACATATTTTCGACTGGCTCCAAGTATCAAGAATAGATATGATTATGGAGTGATGATATTCATGCTCACCTTCAATCTAGTTGTGGTGTCTGGCGTACGTCCTGGTGTGAAAGTCTTGGAAATAGCACGAGAACGTTTCCTGACAATCCTAATGGGTTTCATTGTGTGCGTTTGTGTGAGCTTGTTCGTCTTTCCTTTATGGGCCAGTGATGAACTTCATAATTCCACAGTCTCAAGATTCATGGACCTTGCTAACACAATTCAAGGTTGCTTAGAGGAATGTACAAAAGTCGTCAATGAAAAGGAAAACCAATCCCGTGCTAGCTTCACTGTTTGCAAGTCGGTGTTGAACTCCAAGTCAAAGGATGAATCATTGGCAAATTTTGCAAGATGGGAACCCTGGCATGGAAAATTTGGATTTTCCTACCCTTGGGAAAAGTACTTAAAAATTGGAGAGGCTCTTAGAGAACTGGCTGCAGTTACTCTTACAGCAGGACGTTGCCTCCAAGCGGCCTCAAAACAGTCCAAAACGGTCCAATTAGAACCATGTGAAGCGATTGGGTCAAGGATAGCATGGACTCTGCGAGAACTTGGAGATAGCATGAAGCAAATGAGGAAATGTGAAGCAGGGGACAGCATTTCAACCAAGCTGAAATCAGCAAGAGCAGAGTTAAGCACGGTAATTTCCAAGTCCGAGATAGCAGAAGTTGAGAATGGTGAAGTGCTTGCAATTGCAAGCTTCGTGTTCTTGCTCATGGAAGTGGTGGAGAAGGTAGAGGAATTGGTGAAAGAGGTACATGAACTTGGAGATATCGCTGGTTTTCGTACCCACGTAACTCCAGTGTCTTCTTAG 1338 0.4253 MESTHVISITNGEDNIAHMKEEKALQFPIPPLVSPLEKNEIHFTLVPTTSYLKDKQLKTDHDTRKIIHSIKVGISLVLVSLLYILNPLFEQVRENAMWAIMTVIVIFEFSAGATLGKGFNRGIGTILGGGVGCLTAVFAQSIGGVGNSIIIGISVFIFGSVATYFRLAPSIKNRYDYGVMIFMLTFNLVVVSGVRPGVKVLEIARERFLTILMGFIVCVCVSLFVFPLWASDELHNSTVSRFMDLANTIQGCLEECTKVVNEKENQSRASFTVCKSVLNSKSKDESLANFARWEPWHGKFGFSYPWEKYLKIGEALRELAAVTLTAGRCLQAASKQSKTVQLEPCEAIGSRIAWTLRELGDSMKQMRKCEAGDSISTKLKSARAELSTVISKSEIAEVENGEVLAIASFVFLLMEVVEKVEELVKEVHELGDIAGFRTHVTPVSS* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02987 445 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 59 438 - -
Rops8g02987 445 Pfam Aluminium activated malate transporter 61 431 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02987 Rops-Chr8 66678503 66681047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02987 62 434 Miscellaneous Gene Families AT1G08440 37.795 5.21e-87 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02987 K25841 - gmx:100802201 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02987 8 66678503 66681047 Rops8g02987 8 66678503 66681047 ECH
Rops8g02987 8 66678503 66681047 Rops6g01367 6 29277580 29279788 PCT