Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02963 ATGGCGGCTGTCCCTGCATCGCAGACCGATCCACCGAAAATGGCGTCACCGCAACCGGCGCCGCCCTTGCTGATCTCCGACTCATTCGCCAAGGATGCCATTCTCGCTTGGTTTCGCGGCGAGTTTGCGGCTGCTAACGCCATCATCGACGCTCTCTGTGAACACCTCACACAGATAGCTGCTTCCTCCTCTGAATACGACTCCGCCTTCGCTGCCATCCACCGTCGTCGCCTTAACTGGATCCCTGTCATCCAGATGCAGAAGTATCACTCCATCGCTGACGTGACTCTCGAGCTGAGAAGAGTCGCCGAGAAGAAAATTGAGGCCAAAGAAGGAGGGAGGAAGAGCGGCGAGAGTGAGTTCGATGAGAAAGGAGGGAAAATGGACGATGAGGAAGTGGTGGAGAGTGTTGAAAATGGTGGTGACGAAGCCTCGGTGGAGCCACCGGAGGAGTATGATTCTCCGGACAGTGAGATAACTGATTCAGGATCTCAAGAAATGCAACCCAGTTTGATGAACAATAATATATGTTCCAATCATGAAGAATGTGAAGGACGTTCTTCACAGATAAAGTTGACAAAAGGTTTCACAGCAAAGGAGTCCGTGAAGGGGCATATGGTGAATGTTGTGAAAGGATTAAAGTTGTATGAGGACATTTTTTCTGAATCGGAAATCTGCAAGCTGACTGATTTTGTGAATGAGATCCATGCTGCTGGTCAGAAGGGGGAACTTTCAGGTGAAACGTTTATACTATTCAACAAACAGATGAAGGGGAACAAGAGAGAGCTGATTCAGCTGGGTGTTCCAATATTTGGACAGATAAAGGACGATGCCAAAAGCAATATAGAGCCAATTCCTGCACTTCTCCATAGTGTCATTGATCACCTTATTCGATGGCAATTAATTCCAGAGTACAAAAGGCCAAATGGTTGTATAATCAACTATTTTGAAGAGGGGGAATTTTCTCAGCCATTCCTGAAACCACCGCATTTGGATCAACCTCTATCCACCCTTCTTCTCTCTGAATCAACTATGGCTTATGGGCGTATCCTTATGAGTGAAGATGATGGAAACTACAAGGGGCCACTCATGCTTTCATTGAAGAAGGGGTCTCTTTTAGTGATGAGAGGAAACAGTGCTGACATGGCAAGGCACGTAATGTGTCCATCCCCCAACAGAAGGGTGAGCATCACCTTCTTTAGAGTGAGGCCAGACTCCAATCAGTGTCAGTCACCAACTCCTACAATGACAACTGCGATGACCCTTTGGCAACCAGGCATTGTTAGCCCATTTGCTTTGCCAAATGGAGCTCTAAGTGGCTATGAGGCTATGGATATGATGCCCAAATGGGGAATGCTTAGTGCTCCAATGGTCATGCTAACCCCTATGCGCCCTATGGCACCGAATTACCGCAAACTTCCCCGAGGTGGAACTGGGGTTTTCTTGCCGTGGAAGGGGCAATCCAGAAAACAGACAAGGCATCTTCCACCCCGTGCCCAAAAAGGACGCCTTATGGCATTACCTTCCCCAGTTGAATCACACATGGTAGAGTCCATTTCTGAACCCAGCATTACTGTTGAAGGATAG 1587 0.4808 MAAVPASQTDPPKMASPQPAPPLLISDSFAKDAILAWFRGEFAAANAIIDALCEHLTQIAASSSEYDSAFAAIHRRRLNWIPVIQMQKYHSIADVTLELRRVAEKKIEAKEGGRKSGESEFDEKGGKMDDEEVVESVENGGDEASVEPPEEYDSPDSEITDSGSQEMQPSLMNNNICSNHEECEGRSSQIKLTKGFTAKESVKGHMVNVVKGLKLYEDIFSESEICKLTDFVNEIHAAGQKGELSGETFILFNKQMKGNKRELIQLGVPIFGQIKDDAKSNIEPIPALLHSVIDHLIRWQLIPEYKRPNGCIINYFEEGEFSQPFLKPPHLDQPLSTLLLSESTMAYGRILMSEDDGNYKGPLMLSLKKGSLLVMRGNSADMARHVMCPSPNRRVSITFFRVRPDSNQCQSPTPTMTTAMTLWQPGIVSPFALPNGALSGYEAMDMMPKWGMLSAPMVMLTPMRPMAPNYRKLPRGGTGVFLPWKGQSRKQTRHLPPRAQKGRLMALPSPVESHMVESISEPSITVEG* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02963 528 Gene3D - 196 411 IPR037151 -
Rops8g02963 528 MobiDBLite consensus disorder prediction 158 178 - -
Rops8g02963 528 MobiDBLite consensus disorder prediction 1 20 - -
Rops8g02963 528 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 307 404 IPR005123 -
Rops8g02963 528 SUPERFAMILY Clavaminate synthase-like 203 403 - -
Rops8g02963 528 MobiDBLite consensus disorder prediction 108 178 - -
Rops8g02963 528 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 30 507 IPR044842 GO:0003729|GO:0006402|GO:0032451
Rops8g02963 528 MobiDBLite consensus disorder prediction 108 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02963 Rops-Chr8 66328516 66335666 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02963 K10767 - gmx:100776159 879.782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02963 8 66328516 66335666 Rops8g02963 8 66328516 66335666 ECH
Rops8g02963 8 66328516 66335666 Rops6g02232 6 40784385 40789951 PCT