Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02232 ATGGCGGCTGGTTCAGCTGCATCACTCTCCGATCGTGTTCCCCTTCACCAACCTCCGCCCATGCTTGTCTCCGATTCCGTTGCCAAGGACGCTATCCTTGCCTGGTTTCGCGGCGAGTTCGCCGCCGCCAACGCTATCATCGACGCACTCTGTGCTCACCTCGCTAACCTCTCCTCCGCCTCTGATTACCACTCTGTCTTCACCGCCATCCACCGTCGGAGGCTCCATTGGATCCCTGTTCTCCAGATGCAGAAGTATCACTCCATTGCTGATGTTGCTCTTCAGCTCCGTAAGGTCGCTGAGAAGCAAACGCAACCTGATGTTAATGAAAACGACGTCGTTGAGGCTGAACAGAAAATTGATGAGAAAGTGAGTGATGATGGTGTTGAGAATGGTGGTGGTGATCAACATGATCAGGAGTATGATTCCCCAGAGAGCGAGATTACTGATTCAGGATCTCAAGAAAATCAGGCTTGTTCGATGAACATTAATATATGTTCCAATCATGAAGAGTGTGAAGGACGTTCTTCACAGTTTAAGTTGACAAAAGGTTTCACAGCAAAGGAGTCAGTGAAGGGGCACATGGTGAATGTTGTGAAAGGATTGAAGTTATACGAGAACATTTTCACTGATTCAGAACTGTACAAGCTGACAGATTTTGTGAATGAGATCCATACTGCTGGCCAGAATGGGGAACTCTCAGGTGAAACTTTTATATTATTCAACAAACAGATGAAGGGAAATAAGAGAGAGCTGATTCAGCTGGGTGTTCCAATTTTTGGGCAGATAAAGGATGACGCAAAAAGCAATATAGAGCCAATTCCAGAACTTCTGCAACGTGTCATTGATCACCTTATTCAATGGCAATTACTTCCAGAGTACAAAAGACCAAATGGCTGTATCATCAACTTTTTTGAAGAGGGGGAGTTTTCACAGCCATTCCTGAAACCACCGCATCTGGATCAACCCGTATCCACTCTTCTTCTCTCTGAATCAACTATGGCTTTTGGGCGTATCCTTATGAGTGAAAATGATGGGAACTACAAGGGACCACTCATGCTCTCATTGCAGAAGGGCTCTCTTTTAGTGATGAGAGGAAACAGTGCTGACATGGCAAGGCACGTCATGTGTCCATCCCCTAACAGAAGGGTCAGCATCACCTTCTTTAGAGTGAGGCCAGACTCCAATCAATGCCAATCACCAACTCCTGCCATGACAAGTGCAATGACTCTGGTGCAACCTGGCTTTGCTAGCCCATATGCTTTGACAAATGGTGTTCTAAGTGGCTCTGAGGGTATGGATATGATGCCCAAATGGGGAATGCTTCGTGGCCCAATGGTGATGCTAGCACCTATGCGTCCTATGACATTGAATCCCCGCAAACTTGCTGGTGGTGGGACTGGTGTCTTCTTGCCATGGAATGTGCCATCCAGAAAACCAGCGAAGCATCTTCCACCACGTGCCCAAAAAGGAAGGCTTCTGGCATTACCTTCCCCGGTTGAACCACCACACACGGGAGAGTCCACTTCTGAACCCAACATTTGTGTTGAAGGATAA 1557 0.4727 MAAGSAASLSDRVPLHQPPPMLVSDSVAKDAILAWFRGEFAAANAIIDALCAHLANLSSASDYHSVFTAIHRRRLHWIPVLQMQKYHSIADVALQLRKVAEKQTQPDVNENDVVEAEQKIDEKVSDDGVENGGGDQHDQEYDSPESEITDSGSQENQACSMNINICSNHEECEGRSSQFKLTKGFTAKESVKGHMVNVVKGLKLYENIFTDSELYKLTDFVNEIHTAGQNGELSGETFILFNKQMKGNKRELIQLGVPIFGQIKDDAKSNIEPIPELLQRVIDHLIQWQLLPEYKRPNGCIINFFEEGEFSQPFLKPPHLDQPVSTLLLSESTMAFGRILMSENDGNYKGPLMLSLQKGSLLVMRGNSADMARHVMCPSPNRRVSITFFRVRPDSNQCQSPTPAMTSAMTLVQPGFASPYALTNGVLSGSEGMDMMPKWGMLRGPMVMLAPMRPMTLNPRKLAGGGTGVFLPWNVPSRKPAKHLPPRAQKGRLLALPSPVEPPHTGESTSEPNICVEG* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02232 518 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 28 496 IPR044842 GO:0003729|GO:0006402|GO:0032451
Rops6g02232 518 SUPERFAMILY Clavaminate synthase-like 192 392 - -
Rops6g02232 518 MobiDBLite consensus disorder prediction 112 144 - -
Rops6g02232 518 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 296 393 IPR005123 -
Rops6g02232 518 MobiDBLite consensus disorder prediction 496 518 - -
Rops6g02232 518 MobiDBLite consensus disorder prediction 102 154 - -
Rops6g02232 518 Gene3D - 185 400 IPR037151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02232 Rops-Chr6 40784385 40789951 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02232 K10767 - gmx:100791586 825.469
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02232 6 40784385 40789951 Rops6g02232 6 40784385 40789951 ECH
Rops8g02963 8 66328516 66335666 Rops6g02232 6 40784385 40789951 PCT