Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02962 ATGAATTTCTTCAAATCCGTTTTCTCCGATGACCCGGACCCTCCAGGATCCGACTCCGATTCCCACAATGCGCATCGCACCGAATCTCAACACTCACCGGGTTCCGATTTCTCGCCGACCGAACACCGAAGCGACCTCGCCGGCGCCGGCGGGTGGGATTTCGGTGGTTTAATGAAATCACTGAGCTTGAAATCGGAATCAATCATGGAGACCTACCGTCGCGATCTGCAGGAATTCGGAATCGGGTTGAAGAAGGAGATGGAAATTGCCCACGGTTCTGTCGACACATTTGGCCACACCATTGACCAGTTTGGCAACACCGTTATCAAAGGAACGGCTCAGATGATATCTCAAGGCAAGGAAGCCATCCTCGAATTTGATGATTCATATAACAACAAAAACGGTAGCAATAATAAGAGCTTGAATTCCAAACGCTATAGTAGGTTTGATGCTCAGGTTCGTGCTATCCAGGGTGACCCTAGTACTTACACCCAAGAGCCTGAGGATTTGGAACGTTATAACAAGTGGAAATCGGAGTTTTCTTTGGAAGGGAAGAGTGATGAAATGGAGGGGTTTCTCAGAGAGAATGATGCTATGGACAGTGTTTACAAAAGGGTTGTTCCTGACACCGTTGATCGTGACACGTTCTGGTATAGGTATTACTATAGAGTTTATAAGCTCAAGATAGCTGAGGATGTGAGGGCTAGGCTTGTGAGAAGAATGTCCAAGGAAGAGGAAGAGCTGAGTTGGGATGTTGAAGATGATGAGGAAGAAGAGTGTGTGGATGAGGATCAGGGAAGAATGGGAGATTCTGAGGTGAAAGATGGTGGCTTTGATGTTAATTGGGTGGTGGGAACAAAGAGATTCAATGTGGAAGAGGTAGGCAATGCTGGTGGGGAGGAATCTATGGTAGAAAAGAGGGATAATTTATTGGAAAGTAAGGAACTTGGTGACAAGATGGATCAGTCTATTGGGGAATCAAAAATTGCCAAGAATTCACAAGTTGTTGAAAAGATGGGTGATGGAAGCAAGGAAGCTATGGACCAAGTGGGTGACACTGGGAACAGGAATGATGTTGCAGCAGGTTCTGATGAGAAAGTGATGATGGAAAGGAAGGAGGGGGATGGAAAATCTCCACTGGTTGCAAGTCAGCACTCAGAGCATGAGGAAGAGCTTGAGTGGGATGAGATTGAGGATCTTAGTAATATTGATGAAAAGAAGGAAACTCGAAGTGGTCACCCTAGCAAAGTTGATTTGCGGAAGCGACTGAGTGCTGCAGAAGAAGAAGAAGACTTGACTTGGGACATTGAAGAAGATGATGATGATGATGAGCCTGCCAAGGCTTGA 1347 0.461 MNFFKSVFSDDPDPPGSDSDSHNAHRTESQHSPGSDFSPTEHRSDLAGAGGWDFGGLMKSLSLKSESIMETYRRDLQEFGIGLKKEMEIAHGSVDTFGHTIDQFGNTVIKGTAQMISQGKEAILEFDDSYNNKNGSNNKSLNSKRYSRFDAQVRAIQGDPSTYTQEPEDLERYNKWKSEFSLEGKSDEMEGFLRENDAMDSVYKRVVPDTVDRDTFWYRYYYRVYKLKIAEDVRARLVRRMSKEEEELSWDVEDDEEEECVDEDQGRMGDSEVKDGGFDVNWVVGTKRFNVEEVGNAGGEESMVEKRDNLLESKELGDKMDQSIGESKIAKNSQVVEKMGDGSKEAMDQVGDTGNRNDVAAGSDEKVMMERKEGDGKSPLVASQHSEHEEELEWDEIEDLSNIDEKKETRSGHPSKVDLRKRLSAAEEEEDLTWDIEEDDDDDEPAKA* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02962 448 MobiDBLite consensus disorder prediction 430 448 - -
Rops8g02962 448 PANTHER SYNAPSE-ASSOCIATED PROTEIN 13 394 - -
Rops8g02962 448 Gene3D BSD domain 137 239 IPR035925 -
Rops8g02962 448 MobiDBLite consensus disorder prediction 400 429 - -
Rops8g02962 448 MobiDBLite consensus disorder prediction 299 325 - -
Rops8g02962 448 MobiDBLite consensus disorder prediction 249 265 - -
Rops8g02962 448 Coils Coil 227 247 - -
Rops8g02962 448 MobiDBLite consensus disorder prediction 15 29 - -
Rops8g02962 448 ProSiteProfiles BSD domain profile. 176 228 IPR005607 -
Rops8g02962 448 MobiDBLite consensus disorder prediction 293 448 - -
Rops8g02962 448 SMART wurzfinal6 176 228 IPR005607 -
Rops8g02962 448 MobiDBLite consensus disorder prediction 1 45 - -
Rops8g02962 448 Pfam BSD domain 176 232 IPR005607 -
Rops8g02962 448 MobiDBLite consensus disorder prediction 363 390 - -
Rops8g02962 448 SUPERFAMILY BSD domain-like 146 233 IPR035925 -
Rops8g02962 448 MobiDBLite consensus disorder prediction 249 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02962 Rops-Chr8 66328512 66330018 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02962 - - pvu:PHAVU_001G147700g 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02962 8 66328512 66330018 Rops8g02962 8 66328512 66330018 ECH
Rops8g02962 8 66328512 66330018 Rops6g02231 6 40778617 40781163 PCT