Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02231 ATGAATTTCTTCAAATCCGTTTTCTCCGACGACCTAGATCCTCCTCAAACCGAATCCGAATCCGAATCCGAATCTGAATCTAAATCCAACAATCCCGAATCCGAACCTGGTGTCGGTGGCGGTGGCGGTGGCGACGGTTGGAACTTTGGGGGCCTAATCAAAACCCTAACATCCAAATCTGAATCCATAATCGAGACATACCGTCGCGATCTGCAGGAATTCAGCACCGGTTTGAAGAGTGAGATTGAGGTTGCCCACGGTTCCGTTGGCCACGTCATCGACGAGTTCGGTAACACCGTCATCAAAGGAACGGCTCAGATCATTTCTCAAGGTAAGGACGCCATCCTAGCCGTCAATCTCGATTCCGATTCCGATAACGCCAACACCAGTCGCAACCTCAGTAACCAAAAGGGCTCTGATTCGAAGCATTATAGCAGGTTTGATGCTCAGGTTCGTGCAATTCAGGGTGATGCTAGCACTTACACTGATGAGCCTGAAGATTTGAGTGAGTTCAATAAATGGAAATCGGAGTTTTCATTGGATGGGAAAAGTGATCAAATGGAGGGCTTTTTAAAAGAGAATGATGCTATGGAGAGTGTCTATAAAAGGGTTGTTCCCAATGTTGTTGATCATGAAACTTTCTGGTATAGGTATTATTATAAGGTTTATAAACTGAAGAAAGCTGAGGATGTTAGGGCCAGGCTTGTGAGGAGAATGTCAAGGGAAGAAGAGGAGTTGAGTTGGGATGTTGAAGATGATGAATATGAAGGTGAAGCTAAGCCAGAGCTTATGATAAAAAAGGAGGTTGATGGTGAAAATATGGGGAAAAGGGTAGTAGTAGATGATACTCAGTTGCAAATTGGTTCCTCTGGTGCTAGTAGCAATGAGGGTGAAACAAAGAGATCAAGTGTGGAAGAGGAGTCTAAATTAGAAAAGAGAGACAATTTATTGCAAAGTGAAGAACTTGGCAACAAGATGGATAAGCCTGTTGAGGAATCAAGAGTTGAGAAATCTGAAGCTGTTCATGAGATGGGTGGTGGAAGTCAGGAAATTACTGAGGACGCACGTGTTGATAAAGCATCAAAGTCACAACTTGATGATTCTGTGAGCAAGAATGATTCTGCAGCTGAATCTAATGAGAAGGTGATAACGGAAAGGAAAGATGATGATGGAAAATCTTCTAGTAAAAATAACGAGTCTTTGGTGGTTGAAAGTCAGAAGCATTCAGCAAATGAGGAGGAAGAGGAAGATCTTGGGTGGGATGATATTGAGGATCTTAGCAGTATCGATGAAAAGAAAGTAACTCAAAGTGGTAGCACAAGCAAAGCTGATTTGAGGAAGCGCCTTAGTGCTGCAGAAGAAGAGGAAGACTTGAGTTGGGACATTGAAGATGATGATGATGAGCCTGCTAAGGCTTGA 1419 0.4334 MNFFKSVFSDDLDPPQTESESESESESKSNNPESEPGVGGGGGGDGWNFGGLIKTLTSKSESIIETYRRDLQEFSTGLKSEIEVAHGSVGHVIDEFGNTVIKGTAQIISQGKDAILAVNLDSDSDNANTSRNLSNQKGSDSKHYSRFDAQVRAIQGDASTYTDEPEDLSEFNKWKSEFSLDGKSDQMEGFLKENDAMESVYKRVVPNVVDHETFWYRYYYKVYKLKKAEDVRARLVRRMSREEEELSWDVEDDEYEGEAKPELMIKKEVDGENMGKRVVVDDTQLQIGSSGASSNEGETKRSSVEEESKLEKRDNLLQSEELGNKMDKPVEESRVEKSEAVHEMGGGSQEITEDARVDKASKSQLDDSVSKNDSAAESNEKVITERKDDDGKSSSKNNESLVVESQKHSANEEEEEDLGWDDIEDLSSIDEKKVTQSGSTSKADLRKRLSAAEEEEDLSWDIEDDDDEPAKA* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02231 472 PANTHER SYNAPSE-ASSOCIATED PROTEIN 16 421 - -
Rops6g02231 472 SUPERFAMILY BSD domain-like 143 231 IPR035925 -
Rops6g02231 472 MobiDBLite consensus disorder prediction 278 472 - -
Rops6g02231 472 MobiDBLite consensus disorder prediction 352 366 - -
Rops6g02231 472 MobiDBLite consensus disorder prediction 283 298 - -
Rops6g02231 472 Pfam BSD domain 174 230 IPR005607 -
Rops6g02231 472 ProSiteProfiles BSD domain profile. 174 226 IPR005607 -
Rops6g02231 472 MobiDBLite consensus disorder prediction 124 143 - -
Rops6g02231 472 Gene3D BSD domain 135 236 IPR035925 -
Rops6g02231 472 MobiDBLite consensus disorder prediction 378 395 - -
Rops6g02231 472 MobiDBLite consensus disorder prediction 124 140 - -
Rops6g02231 472 MobiDBLite consensus disorder prediction 1 45 - -
Rops6g02231 472 MobiDBLite consensus disorder prediction 299 343 - -
Rops6g02231 472 Coils Coil 225 245 - -
Rops6g02231 472 SMART wurzfinal6 174 226 IPR005607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02231 Rops-Chr6 40778617 40781163 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02231 - - gmx:100792113 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02231 6 40778617 40781163 Rops6g02231 6 40778617 40781163 ECH
Rops8g02962 8 66328512 66330018 Rops6g02231 6 40778617 40781163 PCT