Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02958 ATGTTCAAACTAGTGAACAAGAACCTCCGTCGCCTCTATACCCACCTCCGGTGGCCACTCCGGCGCCGTTCCAATTCCAAGTCCAAACTAGTCATCAAGAGGTTTGGAAAAACCGTCCCAAAACCTCAAAACGAACCAACCACCACCACCACCATCACCGTTCCAAAGCCAATACGAATTGCCACCTTCAACGCTGCACTCTTCTCCATGGCACCGGCACTTCCTTTAACAGACGAAACAGCCACCTTCGATGACAAACTGGGACAATCAAACGATCGACCCAGAAGCATTCTGAAACATTCTCCACCAAAGAACCTCAAAAGCAAGCACAAGAAGTCAAAGTTGAGAGTGTCCATCAACTTACCAGACAACGAGATTTCACTTCTTCGGAGCAGGCAAACGAGCTTCTCGGAACACGACAGAGAAGGGTCTTGGAGAAGGGTAGTGGAGGGAGGAGGAGAAGGACACAGAAGGAGAACGGTGGTTGAAGTTCTGAAAGAGTTAAACGCTGACATTTTGGGTCTGCAAGATGTGAAGGCGGAAGAAGAGAATGGGATGAAGCCTTTGTCTGATTTGGCACGAGCTTTAGGAATGAACTACGTCTTTGCTGAAAGCTGGGCACCCCAATACGGCAACGCCGTTTTCTCCAAATGGCCCATCAAACGTTGTAAAGTTCAGAAAATCATTGACCACACTGACTTCAGGAATGTTTTGAAGGCCACTATTGATGTACCCCAAGTAGGTGAACTCAACTTCTACTGTACCCACCTTGATCATCTTGATGAGAATTGGAGGATGAAGCAGATAAATGCAATAATCCAATCTAATGATGAGCCACACATCTTAGCTGGAGGCCTTAATTCATTAGATGAATCAGATTACTCCCAAGAAAGATGGACAGATATTGTAAAGTACTATGAAGAGATGGGAAAGCCAACACCAAAGGTTGAAGTGATGAAATATCTCAAAAGTAGACACTACACGGATGCTAAGGACTTTTCAGGGGAATGTGAGTCTGTTGTCATGATTGCCAAGGGCCAAAGTGTCCAAGGGACATGTAAGTATGGAACTCGTGTAGATTACATATTATCTTCCTCAGATTGCCCCTATAAATTTGTTCCTGGGTCCTATTTAGTCCTTTCTTCCAAAGGGACTTCAGATCATCACATAGTGAAAGTTGATGTGGTAAAAGTAAATAGTAATCCTCAAGAAAATCTAACAAAGAAGCAGCGACAACCAAGACAGAAAGTTGTAAGAATAATGCAATCAACCCCATCAAAAGGTATATGGTAA 1293 0.4408 MFKLVNKNLRRLYTHLRWPLRRRSNSKSKLVIKRFGKTVPKPQNEPTTTTTITVPKPIRIATFNAALFSMAPALPLTDETATFDDKLGQSNDRPRSILKHSPPKNLKSKHKKSKLRVSINLPDNEISLLRSRQTSFSEHDREGSWRRVVEGGGEGHRRRTVVEVLKELNADILGLQDVKAEEENGMKPLSDLARALGMNYVFAESWAPQYGNAVFSKWPIKRCKVQKIIDHTDFRNVLKATIDVPQVGELNFYCTHLDHLDENWRMKQINAIIQSNDEPHILAGGLNSLDESDYSQERWTDIVKYYEEMGKPTPKVEVMKYLKSRHYTDAKDFSGECESVVMIAKGQSVQGTCKYGTRVDYILSSSDCPYKFVPGSYLVLSSKGTSDHHIVKVDVVKVNSNPQENLTKKQRQPRQKVVRIMQSTPSKGIW* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02958 430 MobiDBLite consensus disorder prediction 84 113 - -
Rops8g02958 430 MobiDBLite consensus disorder prediction 85 99 - -
Rops8g02958 430 Pfam Endonuclease/Exonuclease/phosphatase family 155 388 IPR005135 GO:0003824
Rops8g02958 430 Gene3D Endonuclease/exonuclease/phosphatase 141 397 IPR036691 -
Rops8g02958 430 SUPERFAMILY DNase I-like 58 395 IPR036691 -
Rops8g02958 430 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 48 411 - -
Rops8g02958 430 FunFam Endonuclease/exonuclease/phosphatase family protein 146 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02958 Rops-Chr8 66299207 66302098 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02958 - - vra:106757483 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02958 8 66299207 66302098 Rops8g02958 8 66299207 66302098 ECH
Rops8g02958 8 66299207 66302098 Rops6g02224 6 40663380 40667479 PCT