Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02224 ATGATCTCCACAAACCAAGACCCCCTTCCATACCACACCCACTTTTCCATTATGCTCAAGCTCCTCAACAAGAACCTCCGCCGCTTCCTCTCCCATCTCCGGTGGCCAATTCGCCGCCGGTCGAAGTCCAAAGTAGTAGTGATCAACAAGTTGGCGAAGCAAGACCCAAACGATGCCAAACACGAATCAAGCACGAATTTTTCCACTGCGGTTCATCCAAACGCTCAATTGGGTAGTCCAAAACCCGAGAAACCGATTCGGGTCGCGACCTTCAATGCTGCCCTGTTCTCCATGGCACCGGCGCTTCCCAAGGAACCCACCTTTGACGACGAAAACGGCGTCGCATTGAAACACGGAAGACCCTTCGACCTCAATTCACGATCAAAATCCACCAACGACCGCCCCAAAAGCATATTGAAGCAATCTCGATCTTCCCTGAACTCCAATTCCATTAAAGGACCAGAAAACCTGGCCAGCAAGCAACAAAAGTTGACGAAATCGAAGACGAGAGTCTCCATCAATTTACCAGACAACGAGATTTCGATGCTACGAAGCCGACAATCGAGCTTCTCTGAACACGACACATCGGCGAGTTTTTCGGGAAATGGTGGGGTCCACAGTCACAGGAGTAGCAGAACGTTGGTTGAGGTTTTGAGAGAAGTGGATGCTGATGTTTTGGGTTTGCAAGATGTGAAGGCTGAAGAAGAGAATGGGATGAAGCCTTTGTCTGATTTAGCTGCTGCTCTTGGTATGAATTATGTCTTTGCTGAAAGCTGGGCACCTGAATATGGCAACGCTGTCTTGTCTAAGTGGCCGATCAAACGTTGGAATGCTCAAAAGATCTTTGATCACACTGATTTCAGGAATGTTCTGAAGGCCACTATCGAAGTACCCCAAGCAGGTGAACTCAACTTTTACTGTACACACCTTGATCATCTTGATGAGAATTGGCGGATGAAGCAGATAAATGCAATAATCCAATCTAATGACGAGCCTCACATCTTAGCTGGAGGCCTTAATTCACTTGATGAATCGGATTACTCCCAAGAAAGATGGACAGATATTGTAAAGTACTATGAAGAGATGGGAAAGCCAACACCAAAGGTTGAAGTGATGAAATATCTCAAGAGTAAAGACTACACAGATGCTAAGGACTATGCAGGGGAATGCGAATCAGTTGTCATGATTGCCAAAGGCCAAAGTGTCCAAGGGACATGTAAGTATGGAACTCGGGTAGACTACATATTATCATCATCAAATTCTCCATATAAGTTTGTCCCGGGTTCCTATTTAGTGCTTTCTTCCAAAGGGACATCAGATCATCACATAGTGAAAGTTGATGTGGTGAAGGTAAATAACAATCCTCAAGAAAACGTGACGAAGAAACCACAACAACCAAGACAAAAAATTGTAAGAATAACAGAATCAAATCCATCAAAAGGTATCTGGAAAACACACAATGGAGAGATATATTGA 1476 0.4485 MISTNQDPLPYHTHFSIMLKLLNKNLRRFLSHLRWPIRRRSKSKVVVINKLAKQDPNDAKHESSTNFSTAVHPNAQLGSPKPEKPIRVATFNAALFSMAPALPKEPTFDDENGVALKHGRPFDLNSRSKSTNDRPKSILKQSRSSLNSNSIKGPENLASKQQKLTKSKTRVSINLPDNEISMLRSRQSSFSEHDTSASFSGNGGVHSHRSSRTLVEVLREVDADVLGLQDVKAEEENGMKPLSDLAAALGMNYVFAESWAPEYGNAVLSKWPIKRWNAQKIFDHTDFRNVLKATIEVPQAGELNFYCTHLDHLDENWRMKQINAIIQSNDEPHILAGGLNSLDESDYSQERWTDIVKYYEEMGKPTPKVEVMKYLKSKDYTDAKDYAGECESVVMIAKGQSVQGTCKYGTRVDYILSSSNSPYKFVPGSYLVLSSKGTSDHHIVKVDVVKVNNNPQENVTKKPQQPRQKIVRITESNPSKGIWKTHNGEIY* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02224 491 FunFam Endonuclease/exonuclease/phosphatase family protein 200 451 - -
Rops6g02224 491 MobiDBLite consensus disorder prediction 137 171 - -
Rops6g02224 491 MobiDBLite consensus disorder prediction 61 75 - -
Rops6g02224 491 MobiDBLite consensus disorder prediction 109 171 - -
Rops6g02224 491 MobiDBLite consensus disorder prediction 52 83 - -
Rops6g02224 491 MobiDBLite consensus disorder prediction 110 136 - -
Rops6g02224 491 Pfam Endonuclease/Exonuclease/phosphatase family 205 441 IPR005135 GO:0003824
Rops6g02224 491 SUPERFAMILY DNase I-like 203 448 IPR036691 -
Rops6g02224 491 Gene3D Endonuclease/exonuclease/phosphatase 198 450 IPR036691 -
Rops6g02224 491 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 83 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02224 Rops-Chr6 40663380 40667479 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02224 - - gmx:100801298 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02224 6 40663380 40667479 Rops6g02224 6 40663380 40667479 ECH
Rops8g02958 8 66299207 66302098 Rops6g02224 6 40663380 40667479 PCT