Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02907 ATGATGGTGAAGGCTATTCAGATTCAACTATGTGGATTGGTTAGTCAACGTTGGAGTTGGAAACCTCGTACCTCCGTTTCAATCTCATCCTTCTCCCCAATTCCATACCCTAACCCCTTTTTCAAACTACTTCCCACCAACAACACGATCGTTCCTCGCAGGGCTCGATTCGCACCGTTTTGTGCTTCCTCATCGTTTCATTCTGCTGGAAATGTTAGAAGCATAAAGTTCTGTCAATGGTGTGGTGGTTCAACGAAGCATGATATTCCCGAAGGAGAAGAAAAATTGAGAGCCATATGTACAATTTGTGGGAAGATTGCCTATCAGAATCCCAAAATGGTAGTTGGTTGCCTCATTGAACATGATAACAAGGTCCTCCTTTGCAAGAGGAATATTCAACCATCTCATGGCCTTTGGACACTTCCTGCTGGTTATTTGGAAATTGGAGAGTCGGCTGTGGAAGGTGCCATCAGGGAAACAAGGGAGGAAGCAAATGCAGATGTAGAAGTAATTTCTCCCTTTGCCCAATTGGATATTCCTTTAATTGGCCAAACTTATATGATATTCTTAGCAAAGCTGAAGATGCCCCATTTTTCACCTGGTCCAGAATCATCAGAATGCCAACTTTTTCCACTTGATGATATACCTTTTAATTCTCTATCGTTTTCATCAATGGTGGTTACCTTAAGTTTGTATGTCGAGGATATTAAGGCTGGAAAGCCCAAATTCCATTATGGAACCATTAAAAAAAGGCCCGGTACAAGTCCTTCTGATATTCATGCCTACAAGCTTGATCATCATATGCACTCATGA 813 0.4182 MMVKAIQIQLCGLVSQRWSWKPRTSVSISSFSPIPYPNPFFKLLPTNNTIVPRRARFAPFCASSSFHSAGNVRSIKFCQWCGGSTKHDIPEGEEKLRAICTICGKIAYQNPKMVVGCLIEHDNKVLLCKRNIQPSHGLWTLPAGYLEIGESAVEGAIRETREEANADVEVISPFAQLDIPLIGQTYMIFLAKLKMPHFSPGPESSECQLFPLDDIPFNSLSFSSMVVTLSLYVEDIKAGKPKFHYGTIKKRPGTSPSDIHAYKLDHHMHS* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02907 270 Gene3D - 74 109 - -
Rops8g02907 270 ProSiteProfiles Nudix hydrolase domain profile. 110 233 IPR000086 -
Rops8g02907 270 PANTHER NUDIX HYDROLASE 23 77 264 - -
Rops8g02907 270 Pfam Nudix N-terminal 76 109 IPR029401 -
Rops8g02907 270 ProSitePatterns Nudix box signature. 144 165 IPR020084 GO:0016787
Rops8g02907 270 SUPERFAMILY Nudix 76 234 IPR015797 -
Rops8g02907 270 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 110 261 - -
Rops8g02907 270 Pfam NUDIX domain 114 215 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02907 Rops-Chr8 65214253 65217532 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02907 K18453 - gmx:100808417 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02907 8 65214253 65217532 Rops8g02907 8 65214253 65217532 ECH
Rops8g02907 8 65214253 65217532 Rops6g00696 6 17801556 17806069 PCT