Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00696 ATGGATTTTTCTTCTTTCTCATCTACATCGAATGAGTCTCCTGCATCATCACTTGATTTCCCTGGAAATGTTCAAAACATTAAGTTCTGTCAGTGGTGTGGTGGTCCAACAAAGCATGGTATACCTGAAGGAGAAGAAAGGTTGAGAGCTATATGTACAAGTTGTGGGAAGATTGCCTATCAGAATCCAAAGATGGTAGTCGGATGCCTCATTGAGCATGATAACAAGGTCCTCCTTTGCAAGCGGAAGATTGAACCATCTTATGGCCTATGGACACTTCCTGCTGGTTTTTTGGAAATTGGAGAGTCGGCTATGGAAGGTGCTATTAGGGAAACAAGGGAGGAAGCCAATGCTGACGTGGAAGTGATTTCTCCCTTTGCTCAATTGGATATTCCTTTAATTGGCCAAACTTACATGATCTTCTTAGCAAGGCTGAAGAAGCCCCACTTTTCACCTGGTCCAGAGTCATCAGAATGCCGGCTTTTCCCGCTCAATGAAATACCTTTTAGCTCTCTATCTTTTTCGTCAATGATGGTCACTTTAAGTTTGTATGTTGAGGATATTAAGGCAGGAAAGCCCAAATTCCATTATGGCACCATCAACAAAAGGCCTGGTACTAGTCCTTCTGATATTCATGCCTTCACACTGGATCATCATATGCAATCAGGAGCCACAACAAGCTGTACTCTGGATATCTGA 699 0.4278 MDFSSFSSTSNESPASSLDFPGNVQNIKFCQWCGGPTKHGIPEGEERLRAICTSCGKIAYQNPKMVVGCLIEHDNKVLLCKRKIEPSYGLWTLPAGFLEIGESAMEGAIRETREEANADVEVISPFAQLDIPLIGQTYMIFLARLKKPHFSPGPESSECRLFPLNEIPFSSLSFSSMMVTLSLYVEDIKAGKPKFHYGTINKRPGTSPSDIHAFTLDHHMQSGATTSCTLDI* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00696 232 ProSiteProfiles Nudix hydrolase domain profile. 62 185 IPR000086 -
Rops6g00696 232 ProSitePatterns Nudix box signature. 96 117 IPR020084 GO:0016787
Rops6g00696 232 SUPERFAMILY Nudix 28 186 IPR015797 -
Rops6g00696 232 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 62 213 - -
Rops6g00696 232 PANTHER NUDIX HYDROLASE 23 29 216 - -
Rops6g00696 232 Pfam Nudix N-terminal 28 61 IPR029401 -
Rops6g00696 232 Gene3D - 25 61 - -
Rops6g00696 232 Pfam NUDIX domain 66 167 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00696 Rops-Chr6 17801556 17806069 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00696 K18453 - gmx:100777180 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g00696 6 17801556 17806069 Rops6g00696 6 17801556 17806069 ECH
Rops8g02907 8 65214253 65217532 Rops6g00696 6 17801556 17806069 PCT