Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02900 ATGAGGATTGCAATTTGCAAACACGTTAAAAAGACCCAGTGGGCCCCACCCTCATTAGAAGGAAACCTTGCCCCCTCTCTCACTCCCTCATCTTCACACAAACTCTGCGGCTCCACAACAACTAACATCCTCTCCTTCACAACTTCAGGTTGCGTGAAGATGGGGGCTGGTGGCCGAACCTCTGTTCCTTCTCCCAACAGGAAGTTAGAGGCTGACACTGTGAAGCGGGTGCCGTTTGCAAAACCTCCTTTCAGTCTCAGCCAGGTCAAGAAGGCCATTCCCCCTCACTGTTTTCAGCGCTCTGTTCTCCGTTCATTCTCTTATGTCATTTATGACCTTACCATAGCCTTCTGCCTCTATTACATTGCCACCCATTACTTCCACCTCCTTCCTCGCCCTCTCTCTTTCTTGGCCTGGCCAACCTACTGGGCTATCCAAGGTTGCATCCTTACCGGTGTTTGGGTCATTGCTCATGAATGTGGCCACCATGCATTCAGTGACTATCAGTGGCTTGATGATACCGTTGGCCTTGTTCTCCATTCTGCTCTGCTTGTCCCTTACTTTTCATGGAAATACAGCCATCGCCGCCACCATTCCAACACTGGTTCTCTTGAAAGGGATGAAGTCTTTGTACCCAAGAAGAAGTCCGGTATGCAGTGGTACTCTAAATACCTTAACAACCCACTTGGCAGAGTCCTCACAATCACTATCACCCTCACTCTTGGCTGGCCCCTGTACTTGGCTTTCAATGTTTCAGGCAGGCCTTATGAAAGGTTTGCTTGCCACTATGACCCACATGGTCCCATTTACTCAGATCGTGAACGACTTCAAATATATGTATCTGATGCGGGAGTACTTGCAGTATCCTATGGGCTTTTCCGTCTTGTCATGGCAAAAGGGCTAGCTTGGGTTGTGTGCGTTTATGGAGTTCCATTGCTAGTGGTCAATGGATTCTTGGTGTTGATTACATACTTGCAGCATACTCACCCTGCGTTGCCACACTACGATTCATCTGAGTGGGACTGGATGAGAGGAGCTTTAGCAACAGTGGATAGAGACTATGGAATCCTGAACAAGATCTTCCACAATATTACAGACACTCATGTGGCGCATCACTTGTTCTCCACAATGCCACATTATCATGCAATGGAGGCTACAAAGGCAATAAAACCAATTTTGGGAGAGTATTATCGGTTTGATGAGACTCCATTTTACAAGGCATTATGGAGAGAGGCAAAAGAGTGTATTTATGTTGAGCCAGATCAAGGTACTGAGAACAAAGGTGTATTCTGGTACAACAATAAGTTGTGGTGA 1314 0.4703 MRIAICKHVKKTQWAPPSLEGNLAPSLTPSSSHKLCGSTTTNILSFTTSGCVKMGAGGRTSVPSPNRKLEADTVKRVPFAKPPFSLSQVKKAIPPHCFQRSVLRSFSYVIYDLTIAFCLYYIATHYFHLLPRPLSFLAWPTYWAIQGCILTGVWVIAHECGHHAFSDYQWLDDTVGLVLHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKKKSGMQWYSKYLNNPLGRVLTITITLTLGWPLYLAFNVSGRPYERFACHYDPHGPIYSDRERLQIYVSDAGVLAVSYGLFRLVMAKGLAWVVCVYGVPLLVVNGFLVLITYLQHTHPALPHYDSSEWDWMRGALATVDRDYGILNKIFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYRFDETPFYKALWREAKECIYVEPDQGTENKGVFWYNNKLW* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02900 437 Pfam Domain of unknown function (DUF3474) 77 119 IPR021863 GO:0016717
Rops8g02900 437 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 64 435 IPR012171 GO:0016491
Rops8g02900 437 Pfam Fatty acid desaturase 138 397 IPR005804 GO:0006629
Rops8g02900 437 CDD Delta12-FADS-like 100 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02900 Rops-Chr8 65041198 65047585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02900 54 436 Lipid Metabolism Gene Families AT3G12120 76.762 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02900 K10256 - gmx:547815 741.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02900 8 65041198 65047585 Rops8g02900 8 65041198 65047585 ECH
Rops8g02900 8 65041198 65047585 Rops6g00687 6 17654113 17660842 PCT