Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02813 ATGTCTAGCGCTACAAAAGTTTTGGATCCAGCATTCCAGGGAGTGGGTCAAAAAGTCGGGACTGAAATATGGAGGATTGAGAATTTTCAGCCAGTTCCATTGCCCAAATCTGAATATGGGAAATTCTACATGGGAGATTCTTACATCATCTTGCAGACAACACAAGGCAAAGGAGGCGCTTATTCTTATGATATTCACTTCTGGATTGGAAAGGATACAAGTCAGGATGAGGCTGGAACTGCAGCCATTAAAACTGTTGAGCTTGATGCATCTCTTGGAGGACGTGCAGTGCAGCAGAGGGAAATCCAAGGGCATGAGTCTGACAAGTTTTTATCATACTTTAAGCCATGTATTATACCATTAGAGGGGGGTATCGCATCTGGATTTAGAAAACCTGAAGAAGAGGAGTTTGAAACACGTCTGTATGTATGCAGAGGAAAACGAGTTGTCAGAATAAAACAGATCCCTTTTGCACGGTCTTCACTGAATCATGATGATGTATTCATCCTAGACACTCAGAATAAGATTTATCAATTCAATGGTGCAAATTCCAATATTCAGGAAAGAGCCAAGGCTTTGGAAGTTATTCAGTTGTTGAAGGAAAAGTATCATGAAGGGAAATGCGATGTTGCAATTGTTGATGATGGCAAGTTGGATACTGAGTCAGACTCAGGTGAATTTTGGGTCCTCTTTGGTGGTTTTGCTCCCATTGGGAAGAAGGTAATCAGCGAAGATGATATCGTTCCAGAGACCATTCCTGCTCAACTTTATAGTATTGCTGATGGTGAGGTCAAGTCTGTGGAAGGTGAACTTTCTAAATCACTGCTGGAGAACAACAAGTTCTATTTACTGGACTGTGGTGCTGAGGTATTTGTCTGGGTTGGCCGAGTAACACAAGTTGAAGAACGAAAAGCAGCTTGTCAAGCAGCCGAGGAGTTTGTTGCAAGTCAAAAAAGGCCAAAATCTACAAGAATAACCAGGGTCATTCAAGGTTATGAGCCACATTCATTTAAGTCCAATTTTGATTCTTGGCCATCAGGGTCTGCTAATACTGGTGCTGAGGAAGGAAGAGGAAAAGTTGCAGCTTTGCTGAAGCAACAAGGTATGGGTGTGAAAGGTGTGGCAAAAAGCACCCCAGTTAATGAGGAAATTCCACCATTGCTTGAAGGAGGTGGAAAAATGGAGGTATGGCTAATCAATGGAAGTGCTAAGACTCCATTGCCTAAGGAAGATATTGGCAAATTTTATAGTGGAGATTGTTACATAGTACTGTACACTTATCACTCTGGAGAGAGGAAGGAAGACTACTTCTTGTGCTGTTGGTTTGGCAAAGACAGCATTGAGGAGGATCAAAAGATGGCTACTCGGTTGGCTAATACAATGTTCAACTCATTAAAGGGTAGACCTGTTCAGGGTCGCATATATGAAGGTAAAGAGCCACCACAGTTTGTTGCTCTTTTCCAACCTATGGTGGTCCTCAAGGGAGGTTTGAGCTCTGGTTACAAAAAATTCATAGCAGATAAAGGTTTGTCAGATGAGACATACACGGCAGAGAGTATTGCACTTATTCGAATTTCTGGAACATCCATTCATAATAATAAAGCAGTGCAAGTTGATGCAGTGGCGACATTGTTGAATTCTACCGAGTGTTTTCTCCTGCAATCTGGCTCAACAGTTTTTACTTGGCATGGCAATCAATCTTCCTTTGAGCAGCAACAGCTTGCAGCGAAAGTTGCTGAATTTTTAAGGCCAGGAGTTGCTTTAAAGCATGCTAAAGAAGGAACAGAAACCTCAGCTTTCTGGTTTGCCGTGGGAGGAAAACAAAGTTACACCAGCAAAAAAGTCACTAATGAAATTGTCAGGGATCCACATGTGTTCAATTTGTCATTTAATAGAGGAAAGTTACAGATAGAGGAGGTTTACAACTTTTCCCAGGATGATTTGTTAACAGAGGACATCCTCATCCTTGACACGCATGCAGAAGTGTTTGTTTGGATTGGTCACTCTGTGGACCCAAAAGAAAAGCAAAATGCTTTTGAAATTGCCCAGAAATACATAGATAAGGCTGCATCTCTGGAGGGACTATCTCATCATGTACCACTATATAAAGTAACAGAAGGGAATGAACCTTGCTTTTTCACAACATACTTTACTTGGGATCATGCAAAAGCTACGGTTCAAGGGAACTCATTCCAGAAAAAGTTGTCATTGCTTTTTGGTATTGGCCATGCTGTAGAGGAAAAGTCTAATGGATCAAGTCAGGGGGGACCAAGACAAAGGGCAGAAGCTTTGGCTGCCTTAAACTCTGCATTCAATTCATCTCCTGAGGGACCATCTAGTACGGATAAATTGAATGGCTTAAATCAAGGAGGAGCCAGACAAAGGGCAGAAGCTTTAGCTGCCTTAAACTCTGCATTTAATTCATCATCCGGAGCTAAAACTTTTTCTCCCAGGTCATCTGGAAGAAGTCAAGGATCACAAAGAGCAGCAGCAGTGGCTGCTCTTTCTTCAGTTCTTACTGCTGAAAAAAAGAAACCTTCGCCTGAAACTTCTCCTGTGGCAAGCAGTAGTCCTGTTGTGGAAAGTAGCACTTCTGCAGATGCTAAAAGTGAAAGTGCCCATTCTGAAACAGAAGGTCTTGAAGAAGTTACAGAAGCCAAGGAAACTGAGGAACTTACCCCTGAAACTGGTAGCAATGGGGATTCAGAACCAAAACAAGAAAATGTGGAGGATGGAAATGATGGTCAAAATACTCAAAACGTCTTCAGTTATGAGCAATTAAAGACTAAAACTGGTAGTATTGTGTCTGGGATTGATCTTAAACGGAGAGAGGCCTATCTGTCAGATAAAGAGTTTGAAACTGTATTTGGAATGACAAAAGAAGCATTCTCTAAGTTGCCAAGATGGAAGCAAGACATGCTGAAAAAGAAAGTTGATTTGTTCTAG 2946 0.4165 MSSATKVLDPAFQGVGQKVGTEIWRIENFQPVPLPKSEYGKFYMGDSYIILQTTQGKGGAYSYDIHFWIGKDTSQDEAGTAAIKTVELDASLGGRAVQQREIQGHESDKFLSYFKPCIIPLEGGIASGFRKPEEEEFETRLYVCRGKRVVRIKQIPFARSSLNHDDVFILDTQNKIYQFNGANSNIQERAKALEVIQLLKEKYHEGKCDVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVISEDDIVPETIPAQLYSIADGEVKSVEGELSKSLLENNKFYLLDCGAEVFVWVGRVTQVEERKAACQAAEEFVASQKRPKSTRITRVIQGYEPHSFKSNFDSWPSGSANTGAEEGRGKVAALLKQQGMGVKGVAKSTPVNEEIPPLLEGGGKMEVWLINGSAKTPLPKEDIGKFYSGDCYIVLYTYHSGERKEDYFLCCWFGKDSIEEDQKMATRLANTMFNSLKGRPVQGRIYEGKEPPQFVALFQPMVVLKGGLSSGYKKFIADKGLSDETYTAESIALIRISGTSIHNNKAVQVDAVATLLNSTECFLLQSGSTVFTWHGNQSSFEQQQLAAKVAEFLRPGVALKHAKEGTETSAFWFAVGGKQSYTSKKVTNEIVRDPHVFNLSFNRGKLQIEEVYNFSQDDLLTEDILILDTHAEVFVWIGHSVDPKEKQNAFEIAQKYIDKAASLEGLSHHVPLYKVTEGNEPCFFTTYFTWDHAKATVQGNSFQKKLSLLFGIGHAVEEKSNGSSQGGPRQRAEALAALNSAFNSSPEGPSSTDKLNGLNQGGARQRAEALAALNSAFNSSSGAKTFSPRSSGRSQGSQRAAAVAALSSVLTAEKKKPSPETSPVASSSPVVESSTSADAKSESAHSETEGLEEVTEAKETEELTPETGSNGDSEPKQENVEDGNDGQNTQNVFSYEQLKTKTGSIVSGIDLKRREAYLSDKEFETVFGMTKEAFSKLPRWKQDMLKKKVDLF* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02813 981 SUPERFAMILY VHP, Villin headpiece domain 918 981 IPR036886 GO:0003779|GO:0007010
Rops8g02813 981 Gene3D Villin headpiece domain 903 981 IPR036886 GO:0003779|GO:0007010
Rops8g02813 981 CDD gelsolin_S2_like 138 232 - -
Rops8g02813 981 PANTHER VILLIN 4 971 IPR007122 GO:0051015
Rops8g02813 981 FunFam Villin-4 248 354 - -
Rops8g02813 981 Gene3D Severin 616 735 IPR029006 -
Rops8g02813 981 Gene3D Severin 247 356 IPR029006 -
Rops8g02813 981 CDD gelsolin_S3_like 254 343 - -
Rops8g02813 981 MobiDBLite consensus disorder prediction 849 870 - -
Rops8g02813 981 PRINTS Gelsolin family signature 674 693 IPR007122 GO:0051015
Rops8g02813 981 PRINTS Gelsolin family signature 437 455 IPR007122 GO:0051015
Rops8g02813 981 PRINTS Gelsolin family signature 593 612 IPR007122 GO:0051015
Rops8g02813 981 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Rops8g02813 981 PRINTS Gelsolin family signature 645 667 IPR007122 GO:0051015
Rops8g02813 981 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Rops8g02813 981 PRINTS Gelsolin family signature 470 490 IPR007122 GO:0051015
Rops8g02813 981 PRINTS Gelsolin family signature 533 553 IPR007122 GO:0051015
Rops8g02813 981 SMART VILL_6 139 234 IPR007122 GO:0051015
Rops8g02813 981 SMART VILL_6 624 720 IPR007122 GO:0051015
Rops8g02813 981 SMART VILL_6 251 344 IPR007122 GO:0051015
Rops8g02813 981 SMART VILL_6 392 490 IPR007122 GO:0051015
Rops8g02813 981 SMART VILL_6 518 607 IPR007122 GO:0051015
Rops8g02813 981 SMART VILL_6 19 117 IPR007122 GO:0051015
Rops8g02813 981 MobiDBLite consensus disorder prediction 807 925 - -
Rops8g02813 981 CDD gelsolin_S1_like 12 124 - -
Rops8g02813 981 MobiDBLite consensus disorder prediction 770 788 - -
Rops8g02813 981 SUPERFAMILY Actin depolymerizing proteins 383 528 - -
Rops8g02813 981 FunFam Villin-like 1 614 735 - -
Rops8g02813 981 SUPERFAMILY Actin depolymerizing proteins 134 238 - -
Rops8g02813 981 MobiDBLite consensus disorder prediction 871 894 - -
Rops8g02813 981 FunFam Gelsolin 6 131 - -
Rops8g02813 981 Gene3D Severin 5 132 IPR029006 -
Rops8g02813 981 Gene3D Severin 389 517 IPR029006 -
Rops8g02813 981 MobiDBLite consensus disorder prediction 911 925 - -
Rops8g02813 981 FunFam Gelsolin 521 613 - -
Rops8g02813 981 CDD gelsolin_S6_like 622 719 - -
Rops8g02813 981 ProSiteProfiles Headpiece (HP) domain profile. 916 981 IPR003128 GO:0003779|GO:0007010
Rops8g02813 981 SUPERFAMILY Actin depolymerizing proteins 9 148 - -
Rops8g02813 981 MobiDBLite consensus disorder prediction 770 792 - -
Rops8g02813 981 SUPERFAMILY Actin depolymerizing proteins 510 615 - -
Rops8g02813 981 CDD gelsolin_S5_like 519 609 - -
Rops8g02813 981 Gene3D Severin 518 613 IPR029006 -
Rops8g02813 981 Pfam Villin headpiece domain 946 981 IPR003128 GO:0003779|GO:0007010
Rops8g02813 981 SUPERFAMILY Actin depolymerizing proteins 223 345 - -
Rops8g02813 981 Pfam Gelsolin repeat 532 583 IPR007123 -
Rops8g02813 981 Pfam Gelsolin repeat 405 483 IPR007123 -
Rops8g02813 981 Pfam Gelsolin repeat 638 713 IPR007123 -
Rops8g02813 981 Pfam Gelsolin repeat 267 337 IPR007123 -
Rops8g02813 981 Pfam Gelsolin repeat 29 111 IPR007123 -
Rops8g02813 981 Pfam Gelsolin repeat 151 217 IPR007123 -
Rops8g02813 981 SUPERFAMILY Actin depolymerizing proteins 596 717 - -
Rops8g02813 981 MobiDBLite consensus disorder prediction 807 833 - -
Rops8g02813 981 CDD gelsolin_S4_like 386 487 - -
Rops8g02813 981 FunFam Villin-like 1 132 247 - -
Rops8g02813 981 FunFam Villin-4 385 520 - -
Rops8g02813 981 SMART VHP_1 946 981 IPR003128 GO:0003779|GO:0007010
Rops8g02813 981 Gene3D Severin 133 246 IPR029006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02813 Rops-Chr8 63399825 63412305 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02813 - - gmx:100787208 1669.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02813 8 63399825 63412305 Rops6g00585 6 15302995 15327317 PCT