Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Rops6g00585 | ATGTCTAGCACTACAAAAGTTTTGGATCCTGCTTTCCAGGGTGTGGGTCAAAGAGTAGGAACTGAAATATGGAGGATTGAGAACTTTCAGCCAGTTCCATTGCCCAAATCTGAATATGGGAAATTCTACATGGGAGATTCATACATCGTCTTGCGGACATCACAAGGCAAAGGAGGCACTTATTTTTATGATTTACACTTCTGGATCGGAAAGGATACAAGTCAGGATGAGGCTGGAACAGCGGCCATTAAAGCTGTTGAACTTGATGCAGCTCTTGGAGGACGTGCAGTGCAGCACAGGGAAATTCAAGGACATGAATCTGACAAGTTTTTGTCATATTTTAAGCCATGTATAATACCATTAGAAGGGGGTGTTGCATCTGGATTTAGAAAACCTGAAGAAGAGGAGTTTGAAACACGCTTATATGTGTGCAGAGGGAAAAGAGTTGTCAGATTGAAACAGGTTCCTTTTGCAAGGTCTTCATTGAACCATGATGATGTATTCATCCTTGACAGTGAAAATAAGATTTATCAATTCAATGGTGCAAATTCCAATATTCAGGAAAGAGCCAAGGCTTTGGAAGTCATACAGTTTCTGAAAGAAAAATATCATGAAGGGAAATGCGATGTTGCAATTGTTGATGATGGCAAGTTAGACACTGAATCAGACTCAGGTGAATTTTGGGTCCTATTTGGTGGTTTTGCTCCCATTGGAAAGAAGGTAATCAGTGAGGATGATATCATTCCAGAGGCAACTCCTGTTCAGTTGTATAGCATCGTTGATGGTGAAGTCAAGCCTGTGGGAGGTGAACTTTCAAAATCACTGTTTGAAAACAACAAATGCTATTTACTGGACTGTGGTGTTGAGTTATTTATCTGGGTTGGCCGGGTAACACAAGTTGAAGAACGAAAAGCAGCTTGCCAAGCAGCTGAGGAGTTTGTTGCAAGTCAAAATAGGCCAAAATCTACAAGGATAACCAGGATTATTCAAGGTTATGAGACACGTTCTTTTAAGTCCAACTTTGATTCTTGGCCATCAGGATCTGCTGGTACTGGTGCCGAGGAAGGAAGAGGAAAAGTTGCAGCATTGCTTAAGCAACAAGGTATGGGTGTCAAAGGAATGACAAAAAGTACCCCTGTAAATGAGGAAATTCCACCTTTGCTTGAAGGAGGTGGAAAGATGGAGGTATGGCGAATCGATGGAAGTGCTAAGACCCCATTGCCGAAGGAAGATATTGGTAAATTTCATAGTGGAGATTGTTACATTGCACTGTACACATACCATTCTGGTGAGAGGAAAGAAGATTACTTCTTGTGCTGCTGGTTTGGCAAAGACAGCATCGAGGAGGACCAAACAATGGCTACTCGGTTGGTTAATACAATGTCCAACTCATTAAAGGGTAGACCTGTTCAGGGTCGCATATTTGAAGGTAAAGAGCCACCACAGTTTGTTGCTCTTTTCCAACCCATGGTAGTCCTTAAGGGAGGTTTGAGCACTGGATATAAAAATTTAAGAGCAGACAAAGGTTTATCAGATGAGACATACACGGCAGAGTGTATTGCACTTATTCGAATTTCAGGAACTTCCGTTCATAACAACAAGGCAGTGCAAGTTGATGCAGTGCCATCTTCTTTGAATTCTACTGAGTGTTTTGTCCTGCAATCTGGCTCTACAATCTTCACTTGGCATGGGAATCAGTGTTCCTTTGAACAGCAGCAGCTAGCAGCAAAGGTTGCAGAATTTTTACGGCCAGGAGTTGCTTTAAAGCATGCTAAGGAAGGCACAGAAAGCTCGGCTTTCTGGTTTGCACTAGGAGGAAAACAAAGTTACACCAGCAAGAAAGTTACTAATGAGATTGTTAGAGACCCACATCTCTTTGCTGTCTCATTCAATAAAGGAAAGTTTCATGTAGAGGAGGTTTACAACTTCTCCCAAGATGATTTGTTAACGGAGGATATCCTTATACTCGACACACATGCAGAAGTGTTCATTTGGATTGGTCACTCTGTGGACCCAAAAGATAAGCAAAATGCTTTTGAAATTGGCCAGAAATACATAGATATGGCTGCATCTCTGGAGGGACTATCTCCACATGTACCATTATATAAAGTAACAGAAGGGAATGAACCTTGCTTTTTCACAACATACTTTTCATGGGATCATGCAAAAGCTACGGTTCTGGGGAACTCATTCCAGAAAAAGGTGTCACTACTGTTTGGGCTTGGCCACACCGTGGAGGAAAAGTCAAATGGGTCAAGTCTTGGGGGACCAAGACAAAGAGCAGAAGCTTTGGCTGCCTTATCTTCTGCTTTTAATTCATCGTCTGAGAAAGCATCTGCTACGGAACAGGATAGATTGAATGGGTTAATCCAAGGAGGACCAAGACAAAGGGCAGAAGCTTTGGCTGCTTTAAACTCTGCATTTAATTCATCATCTGGGCAGAAGACTTATACTGCTAGGCCATCTGGAAAAGGTCAAGGATCACAAAGAGCAGCAGCAGTAGCTGCTCTTTCATCAGTTCTTACTGCTGAAAAGAAGAAACAGTCACCTGATGGCTCTCCTGTGGCTAGCAGTAGTCCTGTTGCAGAGAGTAGCAGTCCTGAAGCTAAAAGTGAAAGTTCCAATCCCGAAGTCGAAGAAGCTGCAGAAGCCAAGGAAACAGAAGAACTTGCCCCTGAAACTGATAACGATGGGGATTTGGAACCAAAACAAGAAAATGTGGAGGATGGAAATGATAGTCAAATGACGTTCAGTTATGAACAACTAAAGACCAAATCTGGTAATAATGTGTCTGGAATTGATCTTAAGCGGAGAGAGGCCTATCTGTCAGACGAAGAATTCGAAACTGTATTTGGAATGACAAAGGAAGCATTTTATAAATTGCCAAGATGGAAGCAAGACATGCTGAAAAAGAAATACGAATTGTTCTAG | 2931 | 0.42 | MSSTTKVLDPAFQGVGQRVGTEIWRIENFQPVPLPKSEYGKFYMGDSYIVLRTSQGKGGTYFYDLHFWIGKDTSQDEAGTAAIKAVELDAALGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGVASGFRKPEEEEFETRLYVCRGKRVVRLKQVPFARSSLNHDDVFILDSENKIYQFNGANSNIQERAKALEVIQFLKEKYHEGKCDVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVISEDDIIPEATPVQLYSIVDGEVKPVGGELSKSLFENNKCYLLDCGVELFIWVGRVTQVEERKAACQAAEEFVASQNRPKSTRITRIIQGYETRSFKSNFDSWPSGSAGTGAEEGRGKVAALLKQQGMGVKGMTKSTPVNEEIPPLLEGGGKMEVWRIDGSAKTPLPKEDIGKFHSGDCYIALYTYHSGERKEDYFLCCWFGKDSIEEDQTMATRLVNTMSNSLKGRPVQGRIFEGKEPPQFVALFQPMVVLKGGLSTGYKNLRADKGLSDETYTAECIALIRISGTSVHNNKAVQVDAVPSSLNSTECFVLQSGSTIFTWHGNQCSFEQQQLAAKVAEFLRPGVALKHAKEGTESSAFWFALGGKQSYTSKKVTNEIVRDPHLFAVSFNKGKFHVEEVYNFSQDDLLTEDILILDTHAEVFIWIGHSVDPKDKQNAFEIGQKYIDMAASLEGLSPHVPLYKVTEGNEPCFFTTYFSWDHAKATVLGNSFQKKVSLLFGLGHTVEEKSNGSSLGGPRQRAEALAALSSAFNSSSEKASATEQDRLNGLIQGGPRQRAEALAALNSAFNSSSGQKTYTARPSGKGQGSQRAAAVAALSSVLTAEKKKQSPDGSPVASSSPVAESSSPEAKSESSNPEVEEAAEAKETEELAPETDNDGDLEPKQENVEDGNDSQMTFSYEQLKTKSGNNVSGIDLKRREAYLSDEEFETVFGMTKEAFYKLPRWKQDMLKKKYELF* | 977 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Rops6g00585 | 976 | Gene3D | Severin | 246 | 353 | IPR029006 | - | |
| Rops6g00585 | 976 | CDD | gelsolin_S2_like | 138 | 232 | - | - | |
| Rops6g00585 | 976 | FunFam | Villin-like 1 | 614 | 735 | - | - | |
| Rops6g00585 | 976 | MobiDBLite | consensus disorder prediction | 807 | 831 | - | - | |
| Rops6g00585 | 976 | FunFam | Gelsolin | 6 | 131 | - | - | |
| Rops6g00585 | 976 | CDD | gelsolin_S3_like | 254 | 343 | - | - | |
| Rops6g00585 | 976 | SUPERFAMILY | Actin depolymerizing proteins | 510 | 615 | - | - | |
| Rops6g00585 | 976 | CDD | gelsolin_S1_like | 12 | 124 | - | - | |
| Rops6g00585 | 976 | FunFam | Villin-4 | 248 | 354 | - | - | |
| Rops6g00585 | 976 | Pfam | Villin headpiece domain | 941 | 976 | IPR003128 | GO:0003779|GO:0007010 | |
| Rops6g00585 | 976 | CDD | gelsolin_S6_like | 622 | 720 | - | - | |
| Rops6g00585 | 976 | Gene3D | Severin | 5 | 132 | IPR029006 | - | |
| Rops6g00585 | 976 | SMART | VILL_6 | 392 | 490 | IPR007122 | GO:0051015 | |
| Rops6g00585 | 976 | SMART | VILL_6 | 624 | 719 | IPR007122 | GO:0051015 | |
| Rops6g00585 | 976 | SMART | VILL_6 | 252 | 344 | IPR007122 | GO:0051015 | |
| Rops6g00585 | 976 | SMART | VILL_6 | 139 | 234 | IPR007122 | GO:0051015 | |
| Rops6g00585 | 976 | SMART | VILL_6 | 520 | 607 | IPR007122 | GO:0051015 | |
| Rops6g00585 | 976 | SMART | VILL_6 | 19 | 117 | IPR007122 | GO:0051015 | |
| Rops6g00585 | 976 | SUPERFAMILY | Actin depolymerizing proteins | 129 | 237 | - | - | |
| Rops6g00585 | 976 | Gene3D | Villin headpiece domain | 900 | 976 | IPR036886 | GO:0003779|GO:0007010 | |
| Rops6g00585 | 976 | CDD | gelsolin_S5_like | 520 | 609 | - | - | |
| Rops6g00585 | 976 | MobiDBLite | consensus disorder prediction | 873 | 908 | - | - | |
| Rops6g00585 | 976 | SUPERFAMILY | Actin depolymerizing proteins | 596 | 718 | - | - | |
| Rops6g00585 | 976 | MobiDBLite | consensus disorder prediction | 807 | 825 | - | - | |
| Rops6g00585 | 976 | SUPERFAMILY | Actin depolymerizing proteins | 9 | 147 | - | - | |
| Rops6g00585 | 976 | FunFam | Villin-like 1 | 132 | 247 | - | - | |
| Rops6g00585 | 976 | Gene3D | Severin | 613 | 734 | IPR029006 | - | |
| Rops6g00585 | 976 | Gene3D | Severin | 389 | 518 | IPR029006 | - | |
| Rops6g00585 | 976 | SUPERFAMILY | Actin depolymerizing proteins | 223 | 348 | - | - | |
| Rops6g00585 | 976 | SUPERFAMILY | Actin depolymerizing proteins | 383 | 529 | - | - | |
| Rops6g00585 | 976 | MobiDBLite | consensus disorder prediction | 843 | 872 | - | - | |
| Rops6g00585 | 976 | SUPERFAMILY | VHP, Villin headpiece domain | 913 | 976 | IPR036886 | GO:0003779|GO:0007010 | |
| Rops6g00585 | 976 | Gene3D | Severin | 133 | 245 | IPR029006 | - | |
| Rops6g00585 | 976 | MobiDBLite | consensus disorder prediction | 909 | 930 | - | - | |
| Rops6g00585 | 976 | SMART | VHP_1 | 941 | 976 | IPR003128 | GO:0003779|GO:0007010 | |
| Rops6g00585 | 976 | Gene3D | Severin | 519 | 612 | IPR029006 | - | |
| Rops6g00585 | 976 | CDD | gelsolin_S4_like | 386 | 487 | - | - | |
| Rops6g00585 | 976 | PRINTS | Gelsolin family signature | 323 | 344 | IPR007122 | GO:0051015 | |
| Rops6g00585 | 976 | PRINTS | Gelsolin family signature | 533 | 553 | IPR007122 | GO:0051015 | |
| Rops6g00585 | 976 | PRINTS | Gelsolin family signature | 645 | 667 | IPR007122 | GO:0051015 | |
| Rops6g00585 | 976 | PRINTS | Gelsolin family signature | 411 | 427 | IPR007122 | GO:0051015 | |
| Rops6g00585 | 976 | PRINTS | Gelsolin family signature | 470 | 490 | IPR007122 | GO:0051015 | |
| Rops6g00585 | 976 | PRINTS | Gelsolin family signature | 593 | 612 | IPR007122 | GO:0051015 | |
| Rops6g00585 | 976 | PRINTS | Gelsolin family signature | 437 | 455 | IPR007122 | GO:0051015 | |
| Rops6g00585 | 976 | PRINTS | Gelsolin family signature | 674 | 693 | IPR007122 | GO:0051015 | |
| Rops6g00585 | 976 | Pfam | Gelsolin repeat | 405 | 483 | IPR007123 | - | |
| Rops6g00585 | 976 | Pfam | Gelsolin repeat | 638 | 713 | IPR007123 | - | |
| Rops6g00585 | 976 | Pfam | Gelsolin repeat | 29 | 111 | IPR007123 | - | |
| Rops6g00585 | 976 | Pfam | Gelsolin repeat | 150 | 217 | IPR007123 | - | |
| Rops6g00585 | 976 | Pfam | Gelsolin repeat | 265 | 337 | IPR007123 | - | |
| Rops6g00585 | 976 | Pfam | Gelsolin repeat | 532 | 583 | IPR007123 | - | |
| Rops6g00585 | 976 | ProSiteProfiles | Headpiece (HP) domain profile. | 911 | 976 | IPR003128 | GO:0003779|GO:0007010 | |
| Rops6g00585 | 976 | MobiDBLite | consensus disorder prediction | 843 | 930 | - | - | |
| Rops6g00585 | 976 | PANTHER | VILLIN | 3 | 966 | IPR007122 | GO:0051015 | |
| Rops6g00585 | 976 | FunFam | Gelsolin | 519 | 613 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Rops6g00585 | Rops-Chr6 | 15302995 | 15327317 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Rops6g00585 | - | - | gmx:100788765 | 1700.26 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Rops6g00585 | 6 | 15302995 | 15327317 | Rops6g00585 | 6 | 15302995 | 15327317 | ECH | |
| Rops8g02813 | 8 | 63399825 | 63412305 | Rops6g00585 | 6 | 15302995 | 15327317 | PCT |