Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02519 ATGTCGTTGAGTGTGGTTAAAATACTTGGCATGCTGGTAGCGGTGGAAGCAAGGAAAAGTGAAGAAGAACCACAGAGAACAAGTCTCTTACACTATACCCAAAGAAAAATGGCATCTCATATTGTCGGATACCCTCGCATGGGTCCCAAGAGAGAGCTGAAGTTTGCTCTTGAGTCGTTTTGGGATGGGAAGAGCAGTGCTGAGGATTTGAAGAAGGTTGCTGCTGATCTCAGAGCATCAATCTGGAAGCAGATGGCTGATGCAGGGATCAAGTACATCCCCAGCAACACTTTCTCTAACTATGATCAGGTTCTTGATGCCACCGCCACCCTCGGCGCCGTTCCACCAAGGTATGGATGGACCGGTGGTGAGATTGGGTTTGATACCTACTTCTCCATGGCCAGAGGTAATGCTACCGTGCCTGCTATGGAGATGACCAAGTGGTTCGACACCAACTACCACTTTATTGTCCCCGAATTGGGACCTGATGTGAACTTCACTTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGCTTGGAGTAGATACCGTTCCTGTCCTCGTTGGCCCTGTATCATACTTGTTGCTCTCTAAACCTGCCAAGGGTGTTGAGAAATCCTTCTCTCTCCTCTCTTTGCTCCCCAAAGTCCTTGCTATCTACAAGGAAGTTATCGCTGATCTGAAGGCAGCCGGTGCTTCATGGATTCAGTTTGATGAACCTACCCTTGTCTTGGACCTTGACTCTCACAAGTTGCAAGCATTTACTGATGCATACTCAGAACTTGCATCTACTTTGTCTGGTTTGAATGTTCTTATTGAGACCTACTTTGCGGACATCCCTGCCGAGGCATTCAAGACCCTCACATCTTTGAGTGGTGTCACTGCATATGGATTTGATTTGGTCCGTGGAACTAAGACTCTTGATTTGATCAAGGGTGGATTCCCCAGTGGAAAATACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATTTGGGCTAATGATCTTGCTGCTTCTCTCAGTACATTGCAGGAACTCCAGGGCGTTGTGGGCAAAGACAAACTTGTTGTGTCCACCTCTTGCTCGCTTCTTCACACTGCTGTTGATCTTGTTAATGAGACCAAGTTGGATGATGAGATCAAGTCATGGCTGGCTTTTGCTGCCCAAAAAATTGTAGAAGTAAATGGATTGGCTAAGGCATTGTCTGGCAACAAGGATGAGGCCTTCTTCTCTGTTAATGCTGCAGCTCAGGCTTCAAGAAAGTCCTCTCCAAGAGTGACTAATGAGGCTGTTCAGAAGGCTGCTGCTGCATTGAAGGGTTCTGACCATCGCCGTGCTACTAATGTCAGTGCGAGGTTGGATGCTCAACAAAAGAAGCTTAATCTTCCAATCCTCCCAACCACCACTATTGGATCCTTCCCTCAGACTGTTGAACTGAGGAGGGTACGCCGTGAATTCAAGGCTAAAAAGATCTCCGAGGAAGAGTATGTCAAGGCAATTAAGGAGGAAATCCGCAAAGTTGTTGAACTTCAAGAAGAACTTGATATTGATGTCTTGGTGCATGGAGAGCCTGAGAGAAATGACATGGTTGAGTACTTTGGAGAGCAATTGTCAGGCTTTGCCTTCACTGTTAATGGGTGGGTGCAATCATATGGATCTCGTTGTGTGAAGCCCCCAATCATCTATGGTGATGTGAGCCGCCCAAAGCCAATGACTGTCTTCTGGTCATCTCTTGCTCAGAGCTTTACCAAACGCCCAATGAAGGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTGTTAGAAACGATCAGCCAAGATCTGAGACTTGCTATCAGATTGCTTTGGCTATCAAGGATGAAGTAGAAGACCTTGAAAAGGGTGGCATTGGTGTTATCCAAATTGATGAGGCTGCTTTGAGAGAAGGGCTACCATTGAGGAAGTCAGAGCAAGCTCACTACTTGGACTGGGCTGTCCATTCCTTCAGGATCACCAATGTTGGTGTCCAGGATTCCACTCAGATCCACACTCACATGTGCTACTCTAACTTCAACGACATCATCCACTCAATCATTGATATGGATGCTGATGTTATCACCATTGAGAACTCTCGTTCTGATGAGAAGCTCCTCTCAGTCTTCCGTGAAGGAGTGAAGTATGGTGCTGGAATTGGTCCTGGTGTGTACGACATCCACTCCCCAAGAATACCACCAACTGAAGAAATTGCTGATAGGATCAACAAGATGCTTGCAGTACTTGAGAAGAACATCTTGTGGGTCAACCCTGACTGTGGTCTCAAGACCCGTAAGTACACAGAGGTCAAGCCAGCCCTCACAAACATGGTTGCTGCAGCAAAACTCATCCGCAACGAGCTTGCCAAGTGA 2400 0.47 MSLSVVKILGMLVAVEARKSEEEPQRTSLLHYTQRKMASHIVGYPRMGPKRELKFALESFWDGKSSAEDLKKVAADLRASIWKQMADAGIKYIPSNTFSNYDQVLDATATLGAVPPRYGWTGGEIGFDTYFSMARGNATVPAMEMTKWFDTNYHFIVPELGPDVNFTYASHKAVDEYKEAKALGVDTVPVLVGPVSYLLLSKPAKGVEKSFSLLSLLPKVLAIYKEVIADLKAAGASWIQFDEPTLVLDLDSHKLQAFTDAYSELASTLSGLNVLIETYFADIPAEAFKTLTSLSGVTAYGFDLVRGTKTLDLIKGGFPSGKYLFAGVVDGRNIWANDLAASLSTLQELQGVVGKDKLVVSTSCSLLHTAVDLVNETKLDDEIKSWLAFAAQKIVEVNGLAKALSGNKDEAFFSVNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTVELRRVRREFKAKKISEEEYVKAIKEEIRKVVELQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSSLAQSFTKRPMKGMLTGPVTILNWSFVRNDQPRSETCYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPLRKSEQAHYLDWAVHSFRITNVGVQDSTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLEKNILWVNPDCGLKTRKYTEVKPALTNMVAAAKLIRNELAK* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02519 799 CDD CIMS_N_terminal_like 39 403 - -
Rops8g02519 799 Hamap 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 37 796 IPR006276 GO:0003871|GO:0008270|GO:0009086
Rops8g02519 799 NCBIfam 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 42 795 IPR006276 GO:0003871|GO:0008270|GO:0009086
Rops8g02519 799 Gene3D - 41 561 IPR038071 -
Rops8g02519 799 CDD CIMS_C_terminal_like 469 792 IPR002629 GO:0003871|GO:0008270|GO:0009086
Rops8g02519 799 Gene3D - 426 794 IPR038071 -
Rops8g02519 799 PIRSF Met_synth_MetE 36 799 IPR006276 GO:0003871|GO:0008270|GO:0009086
Rops8g02519 799 FunFam 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 41 430 - -
Rops8g02519 799 PANTHER 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE 37 798 - -
Rops8g02519 799 Pfam Cobalamin-independent synthase, Catalytic domain 468 791 IPR002629 GO:0003871|GO:0008270|GO:0009086
Rops8g02519 799 SUPERFAMILY UROD/MetE-like 39 431 IPR038071 -
Rops8g02519 799 FunFam 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 431 794 - -
Rops8g02519 799 Coils Coil 496 516 - -
Rops8g02519 799 Pfam Cobalamin-independent synthase, N-terminal domain 39 352 IPR013215 GO:0003871|GO:0008270|GO:0008652
Rops8g02519 799 SUPERFAMILY UROD/MetE-like 433 795 IPR038071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02519 Rops-Chr8 57693919 57700081 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02519 K00549 - gmx:547643 1456.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02519 8 57693919 57700081 Rops8g02519 8 57693919 57700081 ECH
Rops8g02519 8 57693919 57700081 Rops11g03272 11 62420480 62425078 PCT