Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03272 ATGAGCAAAGTCTCGTTTCAGTGTATCGCGCCGTTCACAATCTCACTCTGCTCTCTCTCTTTCTCTCACAACTCTCGCTCCTTTCTTCGTTTTTCTGTGCGTGCTACTTCTTCTCGAGCGATGGCATCCCATATCGTTGGTTATCCCCGCATGGGGCCCAAGAGAGAGCTCAAGTTTGCATTGGAATCCTTTTGGGATGGAAAGAGTAGTGCTGAGGATCTGAAGAAGGTTGCTGCAGACCTTAGGACAGCCATCTGGAAGCAGATGGCTGATGCTGGAATCCAATATATTCCCAGCAACACCTTTTCAAACTATGATCAAGTATTGGACACTACAGCCATGCTCGGCGCAGTTCCTCCTAGATATAATTGGAATGGTGGGGAGATTGGCTTTGATATTTACTTCTCCATGGCAAGAGGAAATGCATCTGTACCAGCTATGGAAATGACCAAGTGGTTCGATACCAACTACCATTACATTGTCCCAGAATTGGGTCCAGAAGTTAAGTTCTCCTATGCATCACACAAGGCCGTGGATGAATACAATGAGGCCAAAGTTCTGGGAATTAACACCGTACCTGTACTTGTGGGACCAGTATCCTACTTGTTGCTGTCAAAGCCTGCTAAGGGTGTTGAGAAATCATTTTCCCTTCTTTCCCTAATTGACAAGATCCTTCCTGTCTACAAGGAAGTTGTGGCTGAACTAAAAGCTGCTGGTGCTACTTGGATTCAGTTTGATGAACCTACGCTTGTAAAGGATCTTGATGCTCACCAGTTACAAGCATTTACTCATGCCTATGCAGAGCTGGAGTCAACTTTGTCTGGTTTGAATGTTCTGATTGAGACATACTTTGCTGATGTCCCTGCTGAAGCATACAAAACACTCACCTCTTTGAAGGCTGTTACTGCATATGGGTTTGACCTTGTTCGTGGAACAAAAACCCTTGATTTGATCAAGCAAGGATTTCCATCTGGAAAATTTCTTTTTGCCGGTGTTGTTGATGGAAGAAATATTTGGGCCAATAATCTTGCATCTTCTCTGAACACTTTGCAGGCGCTTGGGGACATTGTTGGGAAGGACAAAGTTGTGGTTTCCACGTCCTGTTCTCTTCTTCACACTGCAGTTGACTTGGTGAATGAGACCAAGTTGGACCAAGAGATTAAGTCTTGGCTTGCATTTGCAGCACAAAAAGTAGTTGAAGTAAATGCCTTGGCCAAAACATTGTCTGGACAAAAGGATGAGGTTTTCTTTTCATCTAATGCTGCTGCCTTGGCTTCAAGGAAGTCCTCCCCAAGGGTGACAAATGAGGCTGTCCAAAAAGCTGCTGCTGCTTTGAAGGGCTCTGATCACCGCAGGGCCACTAATGTCAGTGCCAGGTTGGATGCTCAACAGAAGAAACTGAATCTTCCTATTCTTCCAACCACTACAATCGGATCCTTCCCTCAGACTGCAGATCTTAGAAGGGTTCGCCGTGAATTCAAGGCCAACAAGATCTCCGAGGAAAATTATATCCGTTTCATTAAGGAGGAAATTAACAATGTTGTGAAACTCCAGGAAGAACTTGACATTGATGTCTTGGTGCATGGAGAGCCTGAGAGGAATGACATGGTTGAGTACTTCGGAGAACAATTATCTGGCTTCGCTTTCACTGCCAATGGGTGGGTGCAATCATATGGATCCCGCTGTGTCAAACCACCCATCATCTATGGTGATGTGAGCCGTCCCAAGCCCATGACTGTCTTCTGGTCTTCAACAGCTCAAAGTTTGACCAAACGACCAATGAAGGGAATGCTTACTGGCCCTGTTACTATTCTGAACTGGTCCTTTGTCAGAGATGACCAGCCCAGATTTGAAACTTGCTACCAGATTGCTTTGGCTATCAAGGATGAGGTTGAAGATCTTGAGAAAGCTGGTATCACTGTCATCCAGATTGATGAGGCTGCTCTAAGAGAAGGTTTACCTCTAAGGAAGTCTGAGGAGGCTTTCTATCTAAACTGGGCAGTTCACTCATTTAGGATTACCAACTGTGGTGTGCAGGACACTACCCAGATTCACACACACATGTGCTACTCGAATTTCAATGATATCATTCACTCAATCATAGATATGGATGCTGATGTGATCACCATCGAGAACTCAAGATCAGATGAGAAGTTACTTTCAGTCTTCCGTGAGGGAGTTAAATATGGAGCTGGCATTGGTCCTGGTGTTTATGACATTCACTCACCAAGGATCCCACCCACAGAAGAAATTGCTGACAGAATCAACAAGATGCTTGCAGTTCTTGAAAGCAACATTCTCTGGGTCAACCCAGATTGTGGTCTCAAGACGCGCAAATACACTGAGGTTAAGCCTGCTCTCACCAACATGGTTGCTGCTGCCAAAGTTATTCGCAACCAGCTAGCTAGTGCCAAGTGA 2418 0.4512 MSKVSFQCIAPFTISLCSLSFSHNSRSFLRFSVRATSSRAMASHIVGYPRMGPKRELKFALESFWDGKSSAEDLKKVAADLRTAIWKQMADAGIQYIPSNTFSNYDQVLDTTAMLGAVPPRYNWNGGEIGFDIYFSMARGNASVPAMEMTKWFDTNYHYIVPELGPEVKFSYASHKAVDEYNEAKVLGINTVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKILPVYKEVVAELKAAGATWIQFDEPTLVKDLDAHQLQAFTHAYAELESTLSGLNVLIETYFADVPAEAYKTLTSLKAVTAYGFDLVRGTKTLDLIKQGFPSGKFLFAGVVDGRNIWANNLASSLNTLQALGDIVGKDKVVVSTSCSLLHTAVDLVNETKLDQEIKSWLAFAAQKVVEVNALAKTLSGQKDEVFFSSNAAALASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTADLRRVRREFKANKISEENYIRFIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSSTAQSLTKRPMKGMLTGPVTILNWSFVRDDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEEAFYLNWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLESNILWVNPDCGLKTRKYTEVKPALTNMVAAAKVIRNQLASAK* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03272 805 PANTHER 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE 41 805 - -
Rops11g03272 805 Gene3D - 430 798 IPR038071 -
Rops11g03272 805 Hamap 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 41 800 IPR006276 GO:0003871|GO:0008270|GO:0009086
Rops11g03272 805 Pfam Cobalamin-independent synthase, N-terminal domain 43 355 IPR013215 GO:0003871|GO:0008270|GO:0008652
Rops11g03272 805 NCBIfam 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 46 800 IPR006276 GO:0003871|GO:0008270|GO:0009086
Rops11g03272 805 CDD CIMS_C_terminal_like 473 796 IPR002629 GO:0003871|GO:0008270|GO:0009086
Rops11g03272 805 FunFam 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 45 434 - -
Rops11g03272 805 Pfam Cobalamin-independent synthase, Catalytic domain 472 795 IPR002629 GO:0003871|GO:0008270|GO:0009086
Rops11g03272 805 SUPERFAMILY UROD/MetE-like 43 435 IPR038071 -
Rops11g03272 805 CDD CIMS_N_terminal_like 43 406 - -
Rops11g03272 805 PIRSF Met_synth_MetE 40 805 IPR006276 GO:0003871|GO:0008270|GO:0009086
Rops11g03272 805 Gene3D - 45 565 IPR038071 -
Rops11g03272 805 SUPERFAMILY UROD/MetE-like 437 800 IPR038071 -
Rops11g03272 805 FunFam 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 435 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03272 Rops-Chr11 62420480 62425078 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03272 K00549 - gmx:100779947 1519.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02519 8 57693919 57700081 Rops11g03272 11 62420480 62425078 PCT