Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02439 ATGGCTTCGGCTACTCTCTCTGTAGCCAAACCAGCTCTTAAGGCTAATGGGAAAGGCTTCTCTGAGTTCTCTGGTCTCCGCAACTCATCAAGCTACCTTCCCTTATCTAGAAAAACTTCAGAGGACTTCCATGCTGTCATTGCCTTCCAAACCTCTGCAGTTGGAAGCAGTGGAGGATACAAGAAGGGTGTAGTAGAAGCCAAACTAAAGGTAGCCATAAACGGGTTTGGTAGGATTGGAAGGAACTTCTTGAGGTGCTGGCATGGTCGTAAGGACTCTCCTCTTGATGTCATTGCCATCAACGACACTGGAGGTGTTAAGCAAGCCTCTCACCTTCTCAAGTATGATTCCACCCTTGGAATCTTTGATGCTGATGTCAAGCCTGAGGGTAATGATGGCATCTCTGTTGATGGAAAGGTCATCAAAGTTGTCTCTAACCGCAACCCTGCCAACCTTCCTTGGAAGGACTTGGGGATTGACTTGGTGATTGAAGGAACTGGTGTGTTTGTGGATAGAGAAGGTGCAGGGAAGCACATTCAAGCAGGAGCTAAGAAGGTGCTTATTACAGCCCCAGGCAAAGGAGACATCCCTACCTATGTGGTTGGTGTCAATGCTGATGCTTACAACCATGATGAACCCATCATCAGCAATGCTTCTTGCACCACTAACTGTCTTGCCCCCTTTGTTAAAGTCCTTGATCAGAAATTTGGTATTATCAAGGGTACCATGACTACCACTCACTCCTACACTGGTGACCAAAGGCTTCTTGATGCCAGCCACCGTGACCTGAGGCGTGCAAGAGCAGCAGCCCTCAACATTGTCCCTACTTCAACAGGAGCAGCAAAGGCTGTGGCCCTTGTCCTCCCAACCCTCAAAGGCAAGCTCAATGGCATTGCACTCCGTGTGCCAACACCAAACGTTTCAGTGGTGGACCTTGTTGTTCAAGTCTCAAAGAAGACCTTTGCAGAAGAAGTGAATGAAGCTTTCAGAGAGAGTGCAGGGAAGGAGCTCAATGGTATCCTCTCAGTTTGTGATGAGCCACTTGTGTCAGTAGATTTTAGGTGCACTGATGTGTCCTCAACTGTTGACTCATCATTGACAATGGTCATGGGAGATGACATGGTCAAGGTGATTGCTTGGTATGACAATGAGTGGGGTTACTCCCAAAGGGTTGTGGATTTGGCTGACATTGTTGCCAACAACTGGAAGTGA 1212 0.4785 MASATLSVAKPALKANGKGFSEFSGLRNSSSYLPLSRKTSEDFHAVIAFQTSAVGSSGGYKKGVVEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVKPEGNDGISVDGKVIKVVSNRNPANLPWKDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYNHDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNEAFRESAGKELNGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02439 403 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 2 68 403 IPR020831 GO:0016620
Rops8g02439 403 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 220 382 - -
Rops8g02439 403 FunFam Glyceraldehyde-3-phosphate dehydrogenase 219 383 - -
Rops8g02439 403 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 68 236 IPR036291 -
Rops8g02439 403 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 218 225 IPR020830 GO:0016620
Rops8g02439 403 SMART gp_dh_n_7 69 220 IPR020828 GO:0051287
Rops8g02439 403 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 225 381 IPR020829 GO:0016620
Rops8g02439 403 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 214 232 IPR020831 GO:0016620
Rops8g02439 403 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 337 352 IPR020831 GO:0016620
Rops8g02439 403 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 241 257 IPR020831 GO:0016620
Rops8g02439 403 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 178 191 IPR020831 GO:0016620
Rops8g02439 403 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 297 314 IPR020831 GO:0016620
Rops8g02439 403 NCBIfam glyceraldehyde-3-phosphate dehydrogenase, type I 70 393 IPR006424 GO:0006006|GO:0016620|GO:0050661|GO:0051287
Rops8g02439 403 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 70 171 IPR020828 GO:0051287
Rops8g02439 403 FunFam Glyceraldehyde-3-phosphate dehydrogenase 69 227 - -
Rops8g02439 403 Gene3D - 70 395 - -
Rops8g02439 403 Gene3D Dihydrodipicolinate Reductase; domain 2 219 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02439 Rops-Chr8 56210037 56213002 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02439 K05298 - tcc:18601182 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02439 8 56210037 56213002 Rops10g00773 10 18207294 18215546 ECH
Rops8g02439 8 56210037 56213002 Rops8g02439 8 56210037 56213002 ECH