Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02401 ATGGCAAATTCACAGGGAGTGGATCGGCACAAGGGTGAAGTTATCCGTTTAGAGCGTGAATCTGTGATTCCAATTCTGAAACCAAGGCTCATCATGACATTGGCTAATCTTATTGAACATAGTTCTGACCGAGCTGAGTTTTTGAAGCTCTGCAAGAGAATAGAGTACACAATTCGAGCTTGGTACCTTCTACAATTTGAGGACTTGATGCAACTCTACTCCCTCTTTGACCCTGTACATGGAGCACAGAAGTTGAAACAGCAGCAGTTAGCTCCTGAAGAAATTGATGTACTTGAACAGAATTTCTTGACATACCTATTTCAGGTCATGGAAAAGAGCAACTTCAAGATAGTGACTGATGATGAGATTGATGTTGCACATTCAGGCCAGTATCTTCTAAATCTTCCTATTACTGTTGATGAATCTAAGCTTGACAAGACACTGTTGAAGAAATATTTTGAAGAGCATCATCATGATGACCTTCCTGATTTCTCTGATAAGTATGTTATCTTTCGTCGTGGCATTGGAATTGATCGCACAACTGACTACTTCGTCATGGAGAAAGTGGACATGCTAATTGCACGTTTTTGGGCATATCTGTTAAGACTGACTAGGTTGGAAAAGCTTTTATCCAGAAGGTCAAAAAGGCGTAATAAGAAAGTTCCAAAGGACAACGAAATTAACTGTGAAGCAAATGGGGATGACCTTTATGTCGAACGGATACGTCTTGAAAATATGCAACTAAGCTTCCGTAATATGCTCGGCAAGACCATGATCCAAGAGCCAACATTTGATAGGATAATTGTTGTCTACAGGAGAGCCAGTACCAAATCAAAAGCTGAACGAGGAATATATGTGAAGCATTTCAAAAACATTCCAATGGCTGATATGGAAATAGTTCTTCCAGAAAAGAAAAACCCTGGATTAACTCCAATGGATTGGGTCAAGTTTCTTGGATCAGCTATAGTTGGGCTGGTTGCTGTATTTAGTTCACTTGAAATGCCAACGGCTGATTGGTGGGTCATCTTTGCTGTTCTCTCCACAGTAATTGGTTATATTGCTAAAACATACTTCACGTTCCAACAAAACATGGCTCAATACCAAAATTTGATCACACAGTCAATGTATGACAAACAACTGGACAGCGGAAAGGGTACACTTCTCCATTTGTGTGATGATGTCATTCAACAGGAAGTCAAAGAGGTTATAGTTTCATTCTTTATTCTGATGGAACAGGGTAAAGCTACAAGACAGGATCTTGATCAATGGTGTGAGGAACTAATCAAAGATGAGTTTGGGGAGGATTGTAATTTTGATGTGGATGATGCTGTTGGGAAATTGGAGAAATTGGGAATTGTTAGTCGGGATTCTATTGGTCGGTTTCAATGTGTTGGGCTGAAACGGGCTAATGAGATCATTGGCACCACCACTGAAGAGCTTGTAATTAAGGCAAAGCAGGGAAACCTTACTCCTTGA 1476 0.4018 MANSQGVDRHKGEVIRLERESVIPILKPRLIMTLANLIEHSSDRAEFLKLCKRIEYTIRAWYLLQFEDLMQLYSLFDPVHGAQKLKQQQLAPEEIDVLEQNFLTYLFQVMEKSNFKIVTDDEIDVAHSGQYLLNLPITVDESKLDKTLLKKYFEEHHHDDLPDFSDKYVIFRRGIGIDRTTDYFVMEKVDMLIARFWAYLLRLTRLEKLLSRRSKRRNKKVPKDNEINCEANGDDLYVERIRLENMQLSFRNMLGKTMIQEPTFDRIIVVYRRASTKSKAERGIYVKHFKNIPMADMEIVLPEKKNPGLTPMDWVKFLGSAIVGLVAVFSSLEMPTADWWVIFAVLSTVIGYIAKTYFTFQQNMAQYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVIVSFFILMEQGKATRQDLDQWCEELIKDEFGEDCNFDVDDAVGKLEKLGIVSRDSIGRFQCVGLKRANEIIGTTTEELVIKAKQGNLTP* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02401 491 PANTHER AMINOPEPTIDASE (DUF3754) 10 488 - -
Rops8g02401 491 Pfam Protein of unknown function (DUF3754) 264 385 IPR022227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02401 Rops-Chr8 55548913 55559575 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02401 - - gmx:100819645 875.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02401 8 55548913 55559575 Rops8g02401 8 55548913 55559575 ECH
Rops8g02401 8 55548913 55559575 Rops5g02056 5 44042217 44053144 PCT