Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g02056 ATGGCACATTCGGGTTCAGAAGTCATTCGATTAGAGCGTGAATCCGTCATTTCAATTTTGAAGCCTAGGCTCATCATGACATTGGCCAACCTTATAAAACTTAGCTCTGACAGAGTTGAGTTTTTGAAGCTCTGCAAGAGAATAGAGTATACGATTCGAGCTTGGTATCTTCTACAGTTTGAGGACATGATGCAACTATACTCCCTCTTTGATCCTGTATCTGGGGCCCAAAAATTGGAACAACGGGAGTTATCTTCCAGAGAAATTGATGAACATGAACAAAACTTCTTGAAGTATCTTTTTCAGGTCATGAAAAAGAGCAACTTCAAGATTGCAACTGAAGATGAGATTGATATTGCGCTTTCTGGACAGTATCTTCTAAATCTTCCCATTACTGTCAATGAATCTAAGCTTGACAAAGTGCTTTTGAAAAGATATTTTGATGCACATCCGTATCATGACCTTCCACATTTCTATGATAAGTATATTATCTTTCGGCGTGGCATTGGACTGGATCAAACAACAGATTTCTTTATCATGGAGAAAGTGGACACGCTCATAGCACGTTTTTGGGCTTATCTATTAAGAATAACTAGGTTGGAAAAGCTTTTATCCCGAAGGTCAAAAAGACATGATAAGAAACATCCAAAGAAGAACGATGAAGTTATCTCAGAAGCTTATCATGAAATTAACTCACAAGCTTATCAAGATTCCGTATATGAACGAATACGTCTTGAAAATATGCCATTAAGTTTTGGTAATCTGCTGACCAAGACTACAATCCAAGAACCTACATTTGATAGGATAATTGTTGTCTACAGGCAAGCCAGTTCTAACACAAAACCAGAACGAGGGATTTTTGTGAAGCATTTCAAAAGCATTCCGATGGCTGATATGGAATTAGTCCTTCCTGAAAAGAAAAATCCTGGATTGACACCAATGGATTGGGTCAAGTTTCTTGGATCTGCTATAGTTGGGTTGGTTGCTGTAGTTAGTTCCCTTGAAGGGGCTTCAGCTGACTTGAGAGTCATTGGTGCTGTTCTCTCCACTGTAGTTGGTTATTGTGTTAAAACATACTTCACATTCCAACAAAACTTGGCTGCATACCAAAATTTGATTACACAGTCAATGTATAACAAACAACTAGACAGTGGAAAGGGTACGCTACTCCATTTATGTGATGATGTCATTCAACAAGAAGTCAAAGAGGTAATAATTTCATTCTTTATTCTGATGGAACAAGGAAAAGCTACAAAAAAGGAACTTGATCAAAGGTGTGAGGAACTAATCAGAGAAGAGTTTAATGAGATTTGTAATTTTGACGTAGATGATGCAGTTGAGAAACTAGAGAAGTTGGGAATTGTCACTCGGGATCCTATTTGCCGGTATCAATGTGTTGGGCTGAAACGGGCAAATGAGATAATTGGCATCACCACTGAAGAGGTTATCCTTAAGGCAAAACAAGGGGGCGCCACTTGA 1479 0.3854 MAHSGSEVIRLERESVISILKPRLIMTLANLIKLSSDRVEFLKLCKRIEYTIRAWYLLQFEDMMQLYSLFDPVSGAQKLEQRELSSREIDEHEQNFLKYLFQVMKKSNFKIATEDEIDIALSGQYLLNLPITVNESKLDKVLLKRYFDAHPYHDLPHFYDKYIIFRRGIGLDQTTDFFIMEKVDTLIARFWAYLLRITRLEKLLSRRSKRHDKKHPKKNDEVISEAYHEINSQAYQDSVYERIRLENMPLSFGNLLTKTTIQEPTFDRIIVVYRQASSNTKPERGIFVKHFKSIPMADMELVLPEKKNPGLTPMDWVKFLGSAIVGLVAVVSSLEGASADLRVIGAVLSTVVGYCVKTYFTFQQNLAAYQNLITQSMYNKQLDSGKGTLLHLCDDVIQQEVKEVIISFFILMEQGKATKKELDQRCEELIREEFNEICNFDVDDAVEKLEKLGIVTRDPICRYQCVGLKRANEIIGITTEEVILKAKQGGAT* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g02056 492 PANTHER AMINOPEPTIDASE (DUF3754) 4 489 - -
Rops5g02056 492 Coils Coil 412 432 - -
Rops5g02056 492 Pfam Protein of unknown function (DUF3754) 266 387 IPR022227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g02056 Rops-Chr5 44042217 44053144 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g02056 - - tpra:123908934 785.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02401 8 55548913 55559575 Rops5g02056 5 44042217 44053144 PCT