Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02294 ATGAAAGGAAAGAACCGGAGAAGTGGTGGCACTGTTCAAATGGATTACCTGATTCACATTCAGGAGATTAAGCCTTGGCCCCCATCACAATCTCTCAGATCCTTTCGTTCTGTATTGATACAATGGGAGAATGGTGAGCGTTCTTCGGGATCTACCAATCTTGTTTCCCCTTCACTTGGTTCTAATGTTGGTGAAGGAAAAATTGAGTTTAACAAGTCATTTAGGCTTCCTGTAACCCTGTTGAGGGATTTGTCTGTAAAAAGTGCTGAAGTGTTCCATAAGAATTGCTTGGAGTTCAACTTGTATGAGCCTCGAAGAGATAAGATTGTCAAAGGTCAGTTGTTGGGGACTTCCATCATAGACTTGGCAGACTGTGGCATACTTAGAGAGCCCTTGAGCATTAGTGCACCATTGAACTGCAAGAGGAACTACAGAAACATGGATCAACCACTTTTGTTCATTAAAATTGAGCCTGTTGGAAAGAATCATGGTAGATTGTCAAAGGACAACAATGGCGGTGACTCTGTATCAGCATTGATGAATGGAGAATATGCTGAGGAAGCTGAGATTGCTTCTTTTACTGATGATGATGTTTCCTCTCATTCATCTGCCGCAGCAGTTAATGCTTCTCCCAAGTCTAGTGGGTTTATGCCTCCTGAACATGAAGAGAATGGACCAGCTCGAACCACTGGTAGGAATGACGAGGAGCATCCCTTGGCTTCAGAAACAAGGGTTGAAAAATTGAATATGATGGTACAGGATACATATGAGAGACTGGAGAGGATTTCATCCCACATGTCATCTATGGATGTATCCTCTGACGTTGGGAGTCCAGTTAATGGTCATACTTCTATGATGAGCACTACCAATCATGGTTTGGTGACAACCCAAAAGCAAGTTGTTTCCCCAAGTGCTGATTCTTCTTCCCTATCCTTGGAAGAAAATTCTATGAGCAGGTCCAGAAGCAGTGATCATGAAAATTCAGATCAGGAGGTCCATGAAAAGGTTGCTAATTGTAGAAATATAAACATTGATGTTCAAACAAAGAGTAATGGAAGTGGTTATTCGAGCAACACTGCACCTCTAGATAGTAATTGCTTCATGGACAGGAATCCAGGCTCTGTGAGTGGTTCGGAAATCAATGACAAATTAAGTGAGAGATGTGAGGAAGCTGACAAATTTTGTGTGAAGGAGGAGGGGAGTGATAAATATTACTATAGTTCTGTTGAGGACAAGCTTGGAAATGAAATGTTTGATTTTGATAAGCAAAACCATGTAGAAGATGAATCAGTGGCTCAAGGTGCCAAAGATCAAGTTTTATTGAGTAGTGGCACATATTCTTTAGGTGGGTCAGATACTGGTATGAAAGGCAATACTCTGAAAAGTGAAAGATTAAAGCATGTAAAGTCTGTAAGGTCTTCAGCAGACTCAGCAAGGAGTATTGGGTCACTTGGTAGCAATCTTCATGCTGAAGTAAAGGAAAATGGCATTAATGGAGATGCCAAAAATGGTGGAGGGTACATCAGAAGCAGTGACAAAAAAGATGCTAAGATTTATCCAAGGGAGGCCAGAACCACCATTTTAGAAAGCAAGATTGGGCATTTGGAAAACAAGATAGAGATGCTTGAAGGAGAGTTAAGAGAAGCTGCTGCAATTGAGGCTGCTTTATATTCAGTAGTTGCTGAGCATGGAAGCTCCATGAGTAAGGTTCATGCCCCAGCTCGGCGCCTTTCCAGGTTGTACCTTCATGTTTGTAAAGAAAATATTCAAGCAAGAAGGTCCGGGGCGGCTAGAAGTGCTGTTTCAGGATTAGCACTTGTTGCAAAGGCATGTGGAAATGATGTCCCAAGGTTGACATTTTGGTTGTCCAATTCTATTGTTTTGAGGACAATTATAAGCCAAACCACCAAAGATGTGGCACCATCAAATCCTGCTGGATCTGGTACTAGAAGGAAGAGTGGAGAGGGGAATGGCAAGATATCACAACCATTAATATGGAAGGGGTTCTCTTCGAGGAAAAGCGAAAATACAGCAGTTGAATATGGAGGTTTTGGTAACTGGGATGACCCAAACGCGTTCACATCAGCACTGGAAAAGGTGGAAGCTTGGATCTTCTCTCGCATTGTGGAATCTATTTGGTGGCAGTCTCTGACACCGCACATGCAGCTTGTTGATGCAAGGGTTACTTATAAGGATGTGGGTTCTGCCTCAAGGAAAAGCTATAAAAAGATGTCTAGCTCATGTGATCAAGAACAGGGAAATTTATCACTAGATATTTGGAAGAATGCTTTTAGAGAAGCCTGTGAAAGGATCTGTCCTATCCGAGCTGGAGGGCATGAGTGTGGCTGTTTGTCTGTGTTGCCTAGATTGATAATGGAGCAGTGTGTAGCGAGATTAGATGTTGCTATGTTCAATGCCATTCTTCGTGCATCTGCTGATGACATTCCATCCGACCCTGTATCTGATCCCATTGGTGATCCCAAGGTTCTCCCCATTCCACCTGGTAAATCAAGCTTTGGAGCCGGTGCACAGCTAAAAACGGCGATTGGTAACTGGTCTAGATGGCTGACTGACCTATTTGGTATGGATGATGATGACTCACCTGAGGATAGAGAAGATGAAGACCTTGATAACAACGACAGAAATCAAAATACGTCCTTCAAGCCCTTCCATCTTCTTAATGCACTAAGTGATCTCTGGATGCTTCCTAAGGATATGCTGTTAAGTGCATCCATCAGAAAAGAGGTCTGCCCAATGTTTAGTGCATCATTAATCAAGAAGATTCTAGAAAATTTTGTCCCAGATGAGTTTTGCCCCGACCCAATTCCCGCTGATGTGTTTGAAGCTCTGGACTCACAGGATGATCTCGAGGATGCAAAGGAGCCTGTCAACATCTTCCCATGCATTGCAGCTCCCATTGCATATTCGCCGCCACCAGCAACAACCATGGCAAGCAGATCGTCTGTTGTCAGGAAGTCATATACCAGTGATGACGAGCTCGATGAATTAAACTCGCCATTATCTTCAATATTATTCAGTGGCTCTTCCTCCTCACCAGTATTAACAAAACCCAACTGGAAGTGGAAAGAAAGTCGCAATGAATCTGCTGTCAGATATGAACTCCTCAGGAATGTTTGGTTGAACAGCGAGTGA 3153 0.4294 MKGKNRRSGGTVQMDYLIHIQEIKPWPPSQSLRSFRSVLIQWENGERSSGSTNLVSPSLGSNVGEGKIEFNKSFRLPVTLLRDLSVKSAEVFHKNCLEFNLYEPRRDKIVKGQLLGTSIIDLADCGILREPLSISAPLNCKRNYRNMDQPLLFIKIEPVGKNHGRLSKDNNGGDSVSALMNGEYAEEAEIASFTDDDVSSHSSAAAVNASPKSSGFMPPEHEENGPARTTGRNDEEHPLASETRVEKLNMMVQDTYERLERISSHMSSMDVSSDVGSPVNGHTSMMSTTNHGLVTTQKQVVSPSADSSSLSLEENSMSRSRSSDHENSDQEVHEKVANCRNINIDVQTKSNGSGYSSNTAPLDSNCFMDRNPGSVSGSEINDKLSERCEEADKFCVKEEGSDKYYYSSVEDKLGNEMFDFDKQNHVEDESVAQGAKDQVLLSSGTYSLGGSDTGMKGNTLKSERLKHVKSVRSSADSARSIGSLGSNLHAEVKENGINGDAKNGGGYIRSSDKKDAKIYPREARTTILESKIGHLENKIEMLEGELREAAAIEAALYSVVAEHGSSMSKVHAPARRLSRLYLHVCKENIQARRSGAARSAVSGLALVAKACGNDVPRLTFWLSNSIVLRTIISQTTKDVAPSNPAGSGTRRKSGEGNGKISQPLIWKGFSSRKSENTAVEYGGFGNWDDPNAFTSALEKVEAWIFSRIVESIWWQSLTPHMQLVDARVTYKDVGSASRKSYKKMSSSCDQEQGNLSLDIWKNAFREACERICPIRAGGHECGCLSVLPRLIMEQCVARLDVAMFNAILRASADDIPSDPVSDPIGDPKVLPIPPGKSSFGAGAQLKTAIGNWSRWLTDLFGMDDDDSPEDREDEDLDNNDRNQNTSFKPFHLLNALSDLWMLPKDMLLSASIRKEVCPMFSASLIKKILENFVPDEFCPDPIPADVFEALDSQDDLEDAKEPVNIFPCIAAPIAYSPPPATTMASRSSVVRKSYTSDDELDELNSPLSSILFSGSSSSPVLTKPNWKWKESRNESAVRYELLRNVWLNSE* 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02294 1050 Coils Coil 525 552 - -
Rops8g02294 1050 MobiDBLite consensus disorder prediction 225 242 - -
Rops8g02294 1050 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 13 124 IPR019448 -
Rops8g02294 1050 MobiDBLite consensus disorder prediction 298 333 - -
Rops8g02294 1050 MobiDBLite consensus disorder prediction 298 317 - -
Rops8g02294 1050 MobiDBLite consensus disorder prediction 638 662 - -
Rops8g02294 1050 MobiDBLite consensus disorder prediction 201 242 - -
Rops8g02294 1050 MobiDBLite consensus disorder prediction 863 883 - -
Rops8g02294 1050 MobiDBLite consensus disorder prediction 638 656 - -
Rops8g02294 1050 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 522 1048 IPR021827 GO:0005643
Rops8g02294 1050 MobiDBLite consensus disorder prediction 318 333 - -
Rops8g02294 1050 ProSiteProfiles C2 NT-type domain profile. 4 160 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02294 Rops-Chr8 52809293 52816259 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02294 - - gmx:100783487 1481.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02294 8 52809293 52816259 Rops8g02294 8 52809293 52816259 ECH
Rops8g02294 8 52809293 52816259 Rops5g01745 5 36190680 36197936 PCT