Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01745 ATGGTTCTGGGCTTGAGAGGAAAGAACAGAAGAAGTGGTAGTGTTCAAATTGATTACCTCATTCATATTCAGGAGATTAAGCCTTGGCCCCCATCACAATCTCTAAGATCCCTTCGTTCTGTGTTGATAGAATGGAAGAATGGTGAATGTTCATCAGGTTCTACCAATCTTGTAGCCCCTTCACTTGGTTCAGTTATAGGTGAAGGAAGAATTGAATTTAATGAGTCATTTAGACTTCCAATAACTTTGATGAGGGATATGGCAGTAAGAGGTGGTGATGCTGATGTGTTCCAAAAGAATAGCTTGGCATTCAACTTGTATGAGCCTAGAAGAGATAAGAGTGTTAAAGGCCAATTACTGGGTAGTGCCATTGTAGACATGGCAGATTATGGAATACTTAAAGAGGCATTGAGCATTAGTGTACCTATAAATTGCAAGAGGAGCTACAGAAACACAGATCAGCCACTTTTGTTCATTAAGATTCAGCCTGTTGAAAAAAACCGTACTAGACCCTCATTGAAGGACAGCTTTTCAAAGGAGGATTTGAAGAACAATAATTGTGGTGATTCTGTATCAGCACTGATGAATGAAGAATATGCTGAGGAAGCTGAGATTGCCTCTTTTACTGATGATGATGTCTCCTCACATTCATCTGTGGCAGCAGTTTCTACTTCCTTTGAGTCCAGTGGGTTTACATCACCTAAATTGGAAAAGAATGAACCAGATGGACCAATTCGAAACACTGGTATGAATGACAAGGAACATCACTTGGATTCAAAAACAAGGCTTGAAAACTTGAAGATGGTGCAAAAAGATACATACAAAAAGCAAGAGAGGAGTTCATCTTACATGTCATCAATGGATGTATCTTCTGTTCTTGGAAGTCCAGTAAATGATCATGCTTCTGTGTCTAAATCTCCAAACCATAATTCATTGTCAACCGGAATATATGTTGCTTCGCCTAGTACTGATTCTTGTTCCCCATCTCCAGTTTGTGACACTTCAAATGTGAATTCCAGGAGTAGGACAAGAAGCACTGATCATGAAAATTTGGATCAGGATATTCATGAAAAGGTTGCTAATTCTAGAAATGTAGTTGCAGATGTTCAAAGAATCAGTAACAAAAGTACTTTTAACATTTATTCAAGGCACACATCATCTCAAGATAGCAGTCACTCTCACTTCATTGGCAAGGATCCAGACCCAGTAAACTGTGATACTTCTAAATATAATGACAAAAATAATGTTAGATGTAAGGAAGATGACAAATATATTGTGAAGGAGGGAGGAGGTGATAAAATTTACTATGGTTCTGTTGAGGACATACATGGAAATGAAAAATCTAATTTGGATGGGCAAAACTGCATGGAAGATGAACAATCTATAGCACAAGGTGCTAAGGATCAAGTCTTATTGGGTAGCACTACACATTCTTTTGGAGGGTCAAATATAATGCAGGGAAATGTTTTCAGAAGTGAAATATCACAGAACATGAAGACTGTGAGATCACCAGCAGACTCAGCTAGGAATACTGGATCAATTGGTAGCAATCATCATGCTGAAGTAAAAGATAATGGCATTCTTGGAGATGCACAAAACAGTGGAGGGAATATCAGAAGCAATGAAAAAAGAGATATTAAGATTTATTCAAAGGAAGCAAGAAATGCCAGTTTAGATGGTAAAAGAGAGCATTTAGAAAAGAAGATAAAGATGCTTGAAGGAGAGTTAAGAGAAGCTGCTGCTATTGAGGTTGCTTTATATTCAGTTGTTGCTGAGCATGAAAGCTCCATGAGTAAAGTCCATGCCCCAGCTCGACGCCTTTCCAGGCTGTATCTTCATGCTTGTAAAGAAAATCTTCAAGGAAGAAGATCCGGGGCAGCTAAAAGTTCTGTTTCAGGATTAGTACTTGTTACAAAGGCATGTGGAAATGATGTCCCAAGGATGACCTTTTGGTTGTCTAATACTATAATGTTGAGAACAATTATAAGCCAAACCTCCAAAAGTTTGGTTCCATCAAATCCTGCTGGATCTAATAGGAGAAGGAAAACTGAGGGAGAAGGATATGCCAAGATAGCATCCTCAATAAGGTGGAATGGATTCTACCCTGGAAAAAATGAAAATAAAACATTAGGTTATGAATGTTTTGGTAACTGGGATGACCCTCATGTATTCACATCAGCACTAGAAAAAGTGGAAGCTTGGATCTTCTCTCGCATTGTAGAATCTATTTGGTGGCAGATTCTGACTCCATATATGCAGCCTTTGGCTACAAAGTTGACCAACAGGGAAGTGAGTTCTTCCTCAGGGAAAAGTTATAGAAGGATATCTAGCTCAAGTGATCAAGAGCAGGGTAACTTATCACTAGATATTTGGAAGAATGCTTTTAGTGAAGCCTGTGAAAGGCTCTGTCCTATTCTTGCTGAAGGGCAAGAGTGTGGCTGTTTGCCTATGCTGCCTAGAATGATAATGGAGCAGTGTGTGGCGAGATTAGATGTGGCTATGTTCAATGCTATTCTTCGTGAGTCTGCTGATGAAATCCCAACTGATCCTGTATCTGATGCTATTAGTGATCCCAATGTTGTTCCCATTCCACCTGGGAATTCAAGCTTTGGAGCCGGTGCTCTGCTAAAAACTGTGATTGGGAACTGGTCTAGATGGTTGAATGACCTATTTGGCATGGATGAGGATGACTCTGATAACAATGACAAGAGACAAAATGCATCCTTCAAGTACTTCAGTCTTCTTAATGCACTAAGTGACCTCCTTATCCTTCCTAAGGACATGCTGTTAAGTGCATCCATCAGGAATGAGGTATGCCCGATGTTTTGTGCACAACTTATCAAGAAGATTCTAGACAATTTTGTGCCAGATGAGTTTTGCCCTGATCCTGTTCCTGCTACTGTTTTTGAAGCCCTGGATTCAGAGAATGATACGAAGGATGGAAAGGAGTCTATCAACAACTTCCCATGCATTGCAGCTCCCATTGCCTATTCACCTCCACCAGCAACTTCCATTGCAAGCATTGTTGGGGAGATGGGAAGCAGATCTTCTTTTATCAGGAAATCATACACAAGTGATGATGATCTTGATGAATTGAAGTCCCCATTATCTTCAATATTCTTCAGTGGTTCCTCATCCTCAGCAGTTTCAACAAAATACAGCTTGAAGTCCAAAGAAAAACGCAATGAATCTCCTGTTAGATATGAACTCCTCAGAGATGTGTGGATGAACAACAAGTAG 3240 0.3969 MVLGLRGKNRRSGSVQIDYLIHIQEIKPWPPSQSLRSLRSVLIEWKNGECSSGSTNLVAPSLGSVIGEGRIEFNESFRLPITLMRDMAVRGGDADVFQKNSLAFNLYEPRRDKSVKGQLLGSAIVDMADYGILKEALSISVPINCKRSYRNTDQPLLFIKIQPVEKNRTRPSLKDSFSKEDLKNNNCGDSVSALMNEEYAEEAEIASFTDDDVSSHSSVAAVSTSFESSGFTSPKLEKNEPDGPIRNTGMNDKEHHLDSKTRLENLKMVQKDTYKKQERSSSYMSSMDVSSVLGSPVNDHASVSKSPNHNSLSTGIYVASPSTDSCSPSPVCDTSNVNSRSRTRSTDHENLDQDIHEKVANSRNVVADVQRISNKSTFNIYSRHTSSQDSSHSHFIGKDPDPVNCDTSKYNDKNNVRCKEDDKYIVKEGGGDKIYYGSVEDIHGNEKSNLDGQNCMEDEQSIAQGAKDQVLLGSTTHSFGGSNIMQGNVFRSEISQNMKTVRSPADSARNTGSIGSNHHAEVKDNGILGDAQNSGGNIRSNEKRDIKIYSKEARNASLDGKREHLEKKIKMLEGELREAAAIEVALYSVVAEHESSMSKVHAPARRLSRLYLHACKENLQGRRSGAAKSSVSGLVLVTKACGNDVPRMTFWLSNTIMLRTIISQTSKSLVPSNPAGSNRRRKTEGEGYAKIASSIRWNGFYPGKNENKTLGYECFGNWDDPHVFTSALEKVEAWIFSRIVESIWWQILTPYMQPLATKLTNREVSSSSGKSYRRISSSSDQEQGNLSLDIWKNAFSEACERLCPILAEGQECGCLPMLPRMIMEQCVARLDVAMFNAILRESADEIPTDPVSDAISDPNVVPIPPGNSSFGAGALLKTVIGNWSRWLNDLFGMDEDDSDNNDKRQNASFKYFSLLNALSDLLILPKDMLLSASIRNEVCPMFCAQLIKKILDNFVPDEFCPDPVPATVFEALDSENDTKDGKESINNFPCIAAPIAYSPPPATSIASIVGEMGSRSSFIRKSYTSDDDLDELKSPLSSIFFSGSSSSAVSTKYSLKSKEKRNESPVRYELLRDVWMNNK* 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01745 1079 Coils Coil 555 582 - -
Rops5g01745 1079 MobiDBLite consensus disorder prediction 239 257 - -
Rops5g01745 1079 MobiDBLite consensus disorder prediction 1042 1064 - -
Rops5g01745 1079 ProSiteProfiles C2 NT-type domain profile. 7 165 IPR019448 -
Rops5g01745 1079 MobiDBLite consensus disorder prediction 320 350 - -
Rops5g01745 1079 MobiDBLite consensus disorder prediction 503 539 - -
Rops5g01745 1079 MobiDBLite consensus disorder prediction 228 257 - -
Rops5g01745 1079 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 15 134 IPR019448 -
Rops5g01745 1079 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 559 1075 IPR021827 GO:0005643
Rops5g01745 1079 MobiDBLite consensus disorder prediction 503 518 - -
Rops5g01745 1079 MobiDBLite consensus disorder prediction 320 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01745 Rops-Chr5 36190680 36197936 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01745 - - gmx:100818584 1409.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02294 8 52809293 52816259 Rops5g01745 5 36190680 36197936 PCT