Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02159 ATGGCTTCTTCGGAAGCCGATTCCCGTCCGAGTCAAATCGTCATTCCCGCGCTCGAGAAAATCATCAAGAACGCATCGTGGAGAAAGCACGCGAAGCTCGCTCATGAATGCAAATCCGTCATCGAAACCCTCACCTCGCCGGAGAAGCTCCAATCACAACCTTCCGATGACGCCGGAGAGCCTGAAGCCTCCGTATCTGGCCCTCTCCACGGCGGAGGCACTGTTGAGTACTCTCTCGCCGAATCCGAATCGATCCTCTCACCTCTGATCAACGCCGCCGGCTCCGGCGTGTTGAAAATCGCCGATCCCGCCGTCGATGCCATCCAGAAACTCATCGCCTTAGGTTACCTCCGTGGCGAGGCCGATGCCACCGGTGGATGCCCTGAATCGAAGCTTCTAGCGAACCTAATCGAATCGGTGTGCAAGTGCCATGACCTAGGCGATGAAGCAATGGAACTTTTGGTTTTGAAGACGCTGTTATCTGCGGTAACTTCTATTTCGTTGAGAATTCACGGTGATTCTTTGCTTTTGATTGTGAGAACTTGTTATGATATATATCTTGGTAGTAAGAATGTGGTGAATCAAACGACGGCAAAAGCATCGTTGATTCAAATGTTAGTGATCGTGTTTAGGAGAATGGAGGCAGATTCATCCACGGTTCCCATTCAGCCAATTGTGGTGGCTGAATTGATGGAACCAGTGGAAAAATCTGATGTAGATAACACAATGACACAGTTTGTGCAGGGTTTTATCACTAAAATTATGCAGGACATTGACGGGGTTTTGAATCCGGTGACGCCGAGTAGGGTTTCAGCAGCATTGGGTGGGCATGATGGTGCTTTTCAGACCACAGCGACAGTGGAGACCACGAATCCGGCGGATTTGTTGGATTCCACCGATAAGGATATGTTGGATGCTAAGTATTGGGAGATTAGTATGTATAAGACGGCTTTGGAGGGGAGGAAAGGGGAGTTGGTAGATGGAGAGGTGGTGGAGAAGGATGATGATTTGGAGATTCAGATTGGGAATAAGTTAAGGAGGGATGCTTTTTTGGTGTTCAGGGCACTTTGTAAATTGTCTATGAAGACACCACCTAAGGAGGCCTCTGCTGATCCGCAGTTGATGAAGGGGAAGATTGTGGCTTTGGAGTTGTTGAAAATTTTGCTGGAGAATGCTGGAGCTGTCTTCAGAACTAGCGAAAGGTTTTTGGGTGCCATCAAGCAGTACTTATGCTTATCATTGTTAAAGAACAGTGCTTCAACTCTTATGATCGTATTTCAGCTATCATGCTCCATCTTCATCAGTCTGGTATCAAGATTTAGAGCTGGATTGAAAGCAGAAATTGGAGTTTTTTTCCCCATGATTGTTCTCAGGGTTCTTGAAAATGTTGCTCAACCTAATTTTCAGCAAAAGATGATAGTGCTTCGTTTTCTAGAGAAACTTTGTGATGATTCACAGATATTGGCAGACATTTTTATCAACTATGACTGTGATGTTAACTCAACAAACATATTTGAGAGGATGGTCAATGGACTTCTTAAAACTGCGCAAGGCATCCCTCCTGGTGTAACAACCACAGTTTTGCCACCTCAAGAGGCAACTCTAAAACTTGAAGCCATGAAATGCTTGGTTGCTGTTTTAAAATCAATGGGAGACTGGATGAACAAACAATTGCGCATTCCAGATCCTCATTCAGGCAAGCAAGTTGAAGCAGTTGATAATGGCCATGAAGCTGGAGGTCTTCCCATGGTAAATGGGAATGGAGAAGAGCCAGTGGAAGGATCAGACACCCATTCTGAAATCTCCAATGAGGCATCTGATGTTGCAACTATAGAGCAACGCCGGGCTTATAAACTAGAACTTCAGGAAGGTATATCACTTTTTAATAGGAAGCCAAAGAAAGGAATTGAGTTCCTCATCAATGCCAACAAAGTGGGTAATTCACCAGAGGAAATAGCTGCTTTCCTTAAAGATGCATCTGGGTTGAACAAGACTTTGATTGGTGATTATCTGGGAGAAAGGGAAGAATTATCCTTGAAAGTAATGCATGCCTATGTGGATTCTTTTGACTTTCAAGGGATGGAGTTTGATGAGGCAATCAGGGTCTTTCTTCAAGGCTTTAGACTGCCTGGTGAGGCACAGAAAATTGATCGAATCATGGAAAAGTTTGCTGAACGTTATTGCAAATGTAATCCAAAAGTCTTTTCTAGTGCTGATACAGCATATGTCCTTGCCTATTCTGTGATAATGCTGAATACTGATGCTCACAATCCTATGGTGAAGAATAAGATGTCGGCTGATGATTTCATAAAAAACAATCGTGGCATAGATGATGGAAAAGATATACCAGAGGAATACTTGAGGTCATTGTTTGAGAGAATATCTAGAAATGAGATCAAAATGAAAGACGTTGATCTTGAACCCCAACAAATACAGGCTGTGAACCCTAATAGACTTTTAGGCTTGGATAGCATATTGAATATTGTGATCCGTAAGCGTGGGGATGACGGTCATATGGAAACCAGTGATGATCTTATCCGGTGTATGCAAGAACAATTCAAAGAAAAAGCTCGCAAAACCGAGTCAGTCTATTATGCGGCAACTGATGTGGTAATCCTTAGATTCATGATTGAGGTCTGCTGGGCACCGATGTTAGCTGCTTTCAGCGTTCCTCTTGACCAAAGTGATGATGAAGTGATAATAGCTCTGTGTCTTGATGGCTTCCGCTATGCTATTCATGTTACTTCTGTAATGTCCATGAAGACACATAGAGATGCTTTTGTGACTTCATTAGCAAAGTTTACCTCCCTGCATTCTCCTGCTGATATTAAGCAGAAAAATGTAGATGCAATCAAGGCGATAGTTACTATTGCTGATGAGGATGGGAATTACTTACAAGAAGCTTGGGAGCATATCTTGACCTGTGTTTCCCGATTTGAGCATCTACATCTTCTCGGAGAGGGGGCTCCACCAGATGCCACATTCTTTGCTTTTCCTCAGAACGATTCTGAAAAAGCAAAACAAACAAAATCAACTATTCTTCCAGTTTTAAAGAAGAAGGGACCTGGGAGGATGCAGTATGCAGCTGGCACAGTGATGCGGGGTTCATATGATAGTGCCGGAATTGGAAGCAATGCTTCTGGAGCTGTCACATCAGAACAGGTGAACAATCTAGTTTCTAATTTGAATATGTTGGAACAAGTTGGAAGCTCGGAAATGAATCGCATATTCACTCGAAGTCAGAAGTTGAACAGTGAGGCCATAATAGATTTTGTGAAGGCTTTATGCAAGGTCTCCATGGAGGAACTGAGATCTCCATCTGATCCGCGGGTGTTCAGCCTTACAAAGATAGTTGAGATTGCGCACTATAACATGAACCGTATCAGGCTTGTGTGGTCAAGCATCTGGCATGTTCTTTCAGATTTCTTTGTAACAATTGGTTGTTCAGGAAACCTTTCGATTGCAATTTTCGCAATGGATTCCTTGCGTCAGTTGTCAATGAAATTTCTTGAGCGAGAAGAGTTGGCTAATTATAATTTTCAAAATGAATTTATGAAGCCTTTCGTCATTGTCATGCGAAAGAGTAGTGCTGTTGAAATTAGAGAACTCATTATCAGATGTGTCTCTCAAATGGTTTTATCTCGTGTCAACAATGTCAAATCAGGATGGAAGAGCATGTTCATGGTATTCACGACAGCAGCATATGATGACCACAAAAACATTGTACTCTTGGCTTTTGAAATCATGGAGAAGATTATTCGAGATTACTTTCCATACATCACTGAGACTGAAACCACCACCTTTACAGATTGTGTGAATTGTCTAATTGCATTCACCAATAGTAGATTTAACAAAGAGATTAGCCTAAATGCCATTGCTTTTCTTCGATTCTGTGCAACAAAACTAGCAGAAGGAGACCTTGGTTTTTCGTCAAGGAATAAGGACAAAGAAACCTTTGGAAAGATTTCCACACCTTCACCCAGAACAGGAAAAGAGGGGAAACAAGATAATGGAGAGGTGACAGACAAGGATGATCATCTCTATTTCTGGTTTCCTTTATTGGCTGGTTTGTCCGAGCTTAGCTTTGACCCAAGGTCTGAGATAAGGCAGAGTGCTTTGCAAGTGCTATTTGAAACCTTACGCAACCATGGCCACCTCTTTTCACTGCCTTTATGGGAAAGAGTATTTGAATCAGTCCTATTTCCAATATTTGATTATGTTCGTCATGCTATTGATCCTTCCGGGAGTAGCTCCCAGGTCAATGAAGTAGAGCCTGATGGTGAACTTGATCAAGATGCATGGCTTTATGAGACATGCACATTAGCCCTCCAATTGGTGGTAGATCTTTTTGTCAACTTCTATAACACTGTTAATCCACTTTTAAGAAAGGTGCTGATGCTCCTTGTAAGCTTTATAAAGCGCCCTCACCAAAGCCTGGCTGGCATTGGCATTGCTGCATTTGTTCGTTTGATGAGTAATGCTGGGGAACTGTTTTCTGATGAGAAGTGGTTAGAAGTGATTTTGTCACTAAAAGATGCAGCAAATGCTACTCTCCCTGACTTTTCATTCCTTGACAGTGGAGACTTTGTGACTGGAAATCATCAACATGCTTTAACAGCTGAAGATGACAAGGATCCTGCTGAGTCTGGCTCACCTAATAATTTAGAAAGCCTGAGGACTCGTCGTCTTTATGCATATTTATCTGATGCAAAATGCCGAGCTGCCGTTCAGCTTTTATTGATTCAGGCGGTGATGGAGATCTATACTATGTACCGATCTCAACTTTCAGCAAAAGCCATGCTAGTACTGTTTGATGCTATGCATGATGTGGCATTACATGCTCACAAGATTAACAGCAATACCATTTTACGTTCAAAGTTACAAGAGTTTGGCTTTGTGACCCAAATGCAAGATCCACCATTGTTACGCCTTGAGAATGAGTCCTATCAAATATGCCTCACATTTTTACAGAACCTTGTTGTGGACAAGCCTCCTAGTTATGAGGAGGCTGAGGTTGAGACTCATCTTGTTCAGCTTTGTGTGGAGGTCTTGGAGTTTTATATTCAAGTTGCAGGTTCCGGACGAGTATCTGAATCTTCTCATGGTAAACAGCAACATTGGTTAATTCCTCTTGGCTCTGGGAAGCGAAGAGAATTGGCTGCACGTGCACCACTTGTTGTGGCTACTCTTCAGGCTATTAGTAATTTGGGAGATATTTCTTTTGAGAAGAACCTGGTGCATTTTTTCCCTCTTCTCTCAAGCTTGATAAGTTGTGAACATGGGTCAAATGAGGTCCAGGTAGCTCTCAGTGATATGCTTAGTTTATCAGTTGGTCCTATTTTGCTACGGTCATGTTGA 5358 0.4267 MASSEADSRPSQIVIPALEKIIKNASWRKHAKLAHECKSVIETLTSPEKLQSQPSDDAGEPEASVSGPLHGGGTVEYSLAESESILSPLINAAGSGVLKIADPAVDAIQKLIALGYLRGEADATGGCPESKLLANLIESVCKCHDLGDEAMELLVLKTLLSAVTSISLRIHGDSLLLIVRTCYDIYLGSKNVVNQTTAKASLIQMLVIVFRRMEADSSTVPIQPIVVAELMEPVEKSDVDNTMTQFVQGFITKIMQDIDGVLNPVTPSRVSAALGGHDGAFQTTATVETTNPADLLDSTDKDMLDAKYWEISMYKTALEGRKGELVDGEVVEKDDDLEIQIGNKLRRDAFLVFRALCKLSMKTPPKEASADPQLMKGKIVALELLKILLENAGAVFRTSERFLGAIKQYLCLSLLKNSASTLMIVFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRVLENVAQPNFQQKMIVLRFLEKLCDDSQILADIFINYDCDVNSTNIFERMVNGLLKTAQGIPPGVTTTVLPPQEATLKLEAMKCLVAVLKSMGDWMNKQLRIPDPHSGKQVEAVDNGHEAGGLPMVNGNGEEPVEGSDTHSEISNEASDVATIEQRRAYKLELQEGISLFNRKPKKGIEFLINANKVGNSPEEIAAFLKDASGLNKTLIGDYLGEREELSLKVMHAYVDSFDFQGMEFDEAIRVFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKVFSSADTAYVLAYSVIMLNTDAHNPMVKNKMSADDFIKNNRGIDDGKDIPEEYLRSLFERISRNEIKMKDVDLEPQQIQAVNPNRLLGLDSILNIVIRKRGDDGHMETSDDLIRCMQEQFKEKARKTESVYYAATDVVILRFMIEVCWAPMLAAFSVPLDQSDDEVIIALCLDGFRYAIHVTSVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNVDAIKAIVTIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQNDSEKAKQTKSTILPVLKKKGPGRMQYAAGTVMRGSYDSAGIGSNASGAVTSEQVNNLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSGNLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSSAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIMEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNKEISLNAIAFLRFCATKLAEGDLGFSSRNKDKETFGKISTPSPRTGKEGKQDNGEVTDKDDHLYFWFPLLAGLSELSFDPRSEIRQSALQVLFETLRNHGHLFSLPLWERVFESVLFPIFDYVRHAIDPSGSSSQVNEVEPDGELDQDAWLYETCTLALQLVVDLFVNFYNTVNPLLRKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGELFSDEKWLEVILSLKDAANATLPDFSFLDSGDFVTGNHQHALTAEDDKDPAESGSPNNLESLRTRRLYAYLSDAKCRAAVQLLLIQAVMEIYTMYRSQLSAKAMLVLFDAMHDVALHAHKINSNTILRSKLQEFGFVTQMQDPPLLRLENESYQICLTFLQNLVVDKPPSYEEAEVETHLVQLCVEVLEFYIQVAGSGRVSESSHGKQQHWLIPLGSGKRRELAARAPLVVATLQAISNLGDISFEKNLVHFFPLLSSLISCEHGSNEVQVALSDMLSLSVGPILLRSC* 1786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02159 1785 FunFam Brefeldin A-inhibited guanine nucleotide-exchange 1 692 810 - -
Rops8g02159 1785 FunFam Brefeldin A-inhibited guanine nucleotide-exchange protein 1 601 690 - -
Rops8g02159 1785 Pfam BIG2 C-terminal domain 1576 1774 IPR046455 -
Rops8g02159 1785 SMART sec7_5 614 799 IPR000904 GO:0005085|GO:0032012
Rops8g02159 1785 MobiDBLite consensus disorder prediction 45 59 - -
Rops8g02159 1785 SUPERFAMILY Sec7 domain 614 805 IPR035999 GO:0005085|GO:0032012
Rops8g02159 1785 CDD Sec7 617 799 IPR000904 GO:0005085|GO:0032012
Rops8g02159 1785 ProSiteProfiles SEC7 domain profile. 610 797 IPR000904 GO:0005085|GO:0032012
Rops8g02159 1785 Gene3D - 691 810 IPR023394 -
Rops8g02159 1785 Pfam C-terminal region of Mon2 protein 1349 1411 IPR032817 -
Rops8g02159 1785 SUPERFAMILY ARM repeat 381 1509 IPR016024 -
Rops8g02159 1785 MobiDBLite consensus disorder prediction 1318 1339 - -
Rops8g02159 1785 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 346 504 IPR032691 -
Rops8g02159 1785 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 71 1650 - -
Rops8g02159 1785 MobiDBLite consensus disorder prediction 45 70 - -
Rops8g02159 1785 Pfam Domain of unknown function (DUF1981) 1168 1250 IPR015403 -
Rops8g02159 1785 Pfam Dimerisation and cyclophilin-binding domain of Mon2 9 216 IPR032629 -
Rops8g02159 1785 Gene3D - 597 690 - -
Rops8g02159 1785 Pfam Sec7 domain 618 799 IPR000904 GO:0005085|GO:0032012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02159 Rops-Chr8 49984222 49997891 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02159 K18442 - gmx:100789988 3198.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02159 8 49984222 49997891 Rops8g02159 8 49984222 49997891 ECH
Rops8g02159 8 49984222 49997891 Rops4g01292 4 34274580 34287049 PCT