Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01292 ATGGCTTCTTTGGAAGCCGATTCCCGTCTGAGTCAGGTCCTCGTTCCCGCACTCGAGAAAATCATCAAGAACGCTTCATGGCGAAAGCACGCGAAGCTCTCTCACGAGTGCAAATCCATAATCGAGAGGCTCAGTCACAATTCATCGCAGAATCAGCAGTTACAGCCAGGTTCTCCCTCCGATGCCGAACCAGAAAACTCCGTTCCCGGTCCAATCCACGACGGCGGTCCGGTGGAATACTCGTTCGACGAATCCGAATCGATCCTCCGTCCTCTCATCAATGCCGCCGGCTCCGGCGTCTTGAAAATCGCTGATCCCGCCGTCGACGCGATCCAGAAACTCATCGCACGCGGCTACCTCCGCGGCGAAGCGGATCCCGGCGGCACCGCACCGGAATCCAAACTACTCTCGAATTTAATCGAATCGGTTTGCAAATGCCACGATTTAGGCGATGAAGCAATGGAATTGCTAGTTATTAAAACGCTCTTATCGGCTGTAACATCGATTTCGTTGCGAATTCATGGTGATTGCTTGCTTCTGATAGTGAGAACGTGTTATGATATATATCTAGTGAGTAAGAATATGGTGAATCAAACAACGGCGAAAGCGTCGTTGATTCAGATGTTAGTGATTGTGTTTAGGAGAATGGAAGCGGATTCTACCACGGTTCCGATTCAGCCCATTGTTGTGGCTGAATTGATGGAGCCAGCGGGAAAATCTGATGTTGATAATTCAATGGCACATTTTGTGCAAGGGTTTATTACTAAGATAATGCAGGATATTGATGGTGTTTTGAAACCTGTTACACCTAGTGGTAAGGTTTCATTGTTAGGTGGTCATGATGGTGCGTTTGAGACAACCACTGTGGAGACAACTAACCCCACTGATTTGTTGGATTCTACTGATAAGGACATGTTGGATGCGAAGTATTGGGAGATTAGTATGTATAAGACTGCATTGGAGGGAAGGAAAGGGGAGCTTGTGGATGGTGAGATTATGGAGAGGGATGATGATTTGGAAGTTCAGATTGGAAACAAGTTGAGGAGGGATGCTTTCTTGGTGTTCAGGGCGCTTTGTAAATTGTCTATGAAGACTCTTCCTAAGGAGGCGTCGGGGGATCCACAGTTGATGAAAGGGAAGATTGTGGCTTTGGAGTTGTTGAAGATTTTGCTGGAGAATGCTGGAGCTGTCTTCAGGACTAGTGAAAGGTTTTTAGATGCCATCAAGCAGTACTTATGTTTATCATTGTTGAAGAACAGTGCTTCAACTCTTTTGATTGTTTTTCAGCTATCATGCTCCATCTTCATCAGTCTGGTATCAAGATTTAGGGCTGGATTGAAAGCAGAAATTGGAGTTTTTTTCCCTATGATTGTTCTTAGGGTCCTAGAAAATGTTTCTCAACCAAATTTTCAGCAGAAGATGATAGTGCTTCGATTTCTAGAGAAGCTTTGCCTTGATTCGCAGATATTGGTTGACATATTTATCAACTATGATTGTGATGTCAATTCATCAAACATATTTGAGAGGATGGTCAATGGACTTCTTAAAACTGCGCAAGGTGTCCCTCCTGGTGTAACGACCACACTTTTGCCACCTCAAGAAGCAACACTAAAACTTGAAGCCATGAAAAGCTTGGTTGCTGTTCTAAAATCAATGGGAGACTGGATGAATAAACAATTGCGGATTCCAGATCCTCATTCAGCCAAGAAAGTTGAAGCAGCTGATAATGGCCCTGAAGCTGGAGGTTTCACCATGGTAAATGGGAATGGAGAAGACCCAGTTGAAGGATCTGACTCTCAATCTGAAATCCCCAATGATGCCTCTGATGTTTCAACTATTGAGCAACGCCGGGCTTATAAACTGGAGCTTCAGGAAGGTATTTCTCTTTTTAATAGAAAGCCTAAGAAAGGAATTGAGTTCCTCATCAATGCCAACAAGGTTGGTGATTCACCGGAGGATATAGCTGCTTTTCTTAAAGATGCATCTGGGTTGAACAAGACTTTGATTGGTGATTATCTGGGAGAAAGGGAAGAATTACCCTTGAAGGTAATGCATGCCTATGTGGATTCCTTTAACTTTCAAGGGATGGAGTTTGATGAGGCAATCAGGGTCTTTGTTCAAGGATTTAGACTTCCTGGTGAGGCACAGAAAATTGATCGGATCATGGAAAAGTTTGCTGAACGTTATTGCAAATGTAATCTGAAGGCCTTTTCTAGTGCTGACACAGCATATGTCCTTGCTTATTCTGTGATATTGCTCAATACGGATGCTCACAATCCTACGGTGAAGAACAAGATGTCTGCTGATGATTTCATAAGAAACAATCGTGGCATTGATGATGGAAAAGATCTGCCTGAGGAATACTTGAGGTCATTGTTTGAGAGAATATCTAGAAATGAGATCAAAATGAAAGAAAATGATGTGGCTCCCCAACAGAGACCGGCTGTGAACCCAAATAGACTTTTAGGCTTGGATAGTATTTTGGATATTGTGATCCTTAAGCGTGGGGAAGAGAGTCATATGGAAACCAGTGATGATCTTATCCGTCATATGCAAGAACAATTCAAAGAAAAAGCTCGCAAAACTGAGTCAGTTTATTATGCAGCAACAGATGTTGTAATCCTCAGATTCATGATTGAGGTGTGTTGGGCACCGATGTTAGCTGCCTTTAGTGTACCTCTTGATCAAAGTGATGATGAAGTTGTAATATCTCTGTGTCTCGAAGGCTTCCGCTATGCTATTCATGTTACTTCTGTAATGTCCATGAAGACTCATAGAGATGCTTTTGTGACTTCATTAGCAAAGTTTACCTCACTGCATTCTCCTGCAGATATTAAGCAGAAAAATATAGATGCCATTAAGGCGATAGTTGCTATTGCTGATGAGGATGGGAATTACTTACAAGAAGCTTGGGAGCATATATTGACTTGTGTTTCCCGATTTGAGCATCTCCATCTTCTCGGAGAGGGGGCTCCACCAGATGCTACATTCTTTGCCTTTCCACAGAATGATTTAGAAAAAACAAAGCAAGCAAAATCAACCATTCTTCCTGTTTTGAAAAAGAAGGGACCAGGGAGGATGCAGTATGCAGCAGCCACATTGATGCGGGGTTCATATGATAGTAATGTTTCTGGAGCAGTCACATCGGAACAGGTGAACAATCTAGTTTCTAATTTGACTATGTTGGAACAAGTTGGAAGCTCTGAAATGAGTCGCATATTCACTCGGAGTCAGAAGTTGAACAGTGAGGCCATAATAGACTTTGTTAAGGCTCTATGCAAGGTCTCCATGGAGGAACTGAGATCTCCATCTGATCCACGGGTTTTCAGCCTTACAAAGATGGTTGAGATTGCGCACTATAATATGAACCGCATCAGGCTTGTGTGGTCAAGCGTCTGGCATGTTGTCTCTGATTTCTTTGTAACCATTGGCTGTTCTGCAAACCTTTCAATTGCAATTTTTGCAATGGATTCCTTGCGTCAGTTGTCAATGAAATTTCTGGAGCGGGAAGAGTTGGCTAATTATAATTTTCAAAATGAATTTATGAAGCCTTTTGTCATTGTTATGCGAAAGAGTAATGCTGTGGAAATTAGAGAACTAATTGTCAGATGTGTCTCTCAAATGGTTCTATCTCGTGTCAACAATGTCAAATCAGGGTGGAAGAGCATGTTCATGGTATTCACAACAGCAGCTTATGATGACCACAAAAACATTGTGCTCTTAGCTTTTGAAATTATTGAGAAGATTATCCGAGATTACTTTCCATACATCACTGAGACTGAAACCACCACCTTCACAGACTGTGTGAATTGTCTAATTGCATTCACCAATAGTAGATTCAACAAAGAGGTTAGCCTAAATGCCATTGCTTTTCTTCAATTCTGTGCAACAAAACTAGCAGAAGGAGACCTTGGCTCATCATCCAGGAATAAAAATAAGGAAGCTTCTGGAAAGATTTCCTCACCTTCACCTCGAACTGGAAAAGAGGAGAAACAAGATAATGGAGAGGTTACTGACAAGGATGATCATCTCTATTTCTGGTTTCCTTTATTGGCAGGTCTATCTGAGCTTAGCTTTGACCCAAGGCCTGAGATCAGGAAGAGAGCCTTGGAAGTCCTATTTGAAACCTTACGCAACCATGGCCATCTCTTTTCACTTCCTTTATGGGAAAAAGTGTTTGAGTCTGTCCTCTTTCCAATATTTGATTATGTTCGACATGCTATTGACCCTTCAGGGAGCAGTTCACAGGTCAATGAAGTAGAGACCGATGGTGAGCTTGATCAAGATGCTTGGGTTTATGAGACATGCACATTAGCCCTCCAATTGGTTGTAGATCTTTTTGTCAACTTCTACGACACTGTCAATCCACTTTTAAAAAAGGTGCTGATGCTCCTGGTAAGCTTTATAAAGCGCCCTCATCAAAGCCTTGCTGGCATTGGTATTGCTGCATTTGTTCGTTTGATGAGTAATGCTGGGGAGCTATTTTCTGGTGAAAAGTGGCTAGAAGTGGTTTTTTCTCTAAAAGCAGCAGCAAATGCAACACTCCCTAACTTTTCATTCCTTGAAAATGAAGACTTTGCTGCTAGAAATCATGATCATGCTTCAACAGCTGAAGATGATACAGATCTTGCCGAGTCTGGCTCACCAGATGATTTAGAAGGCCTAAGGATTCGTCGTCTTTATGCTTATTTGACTGATGCAAAATGCCGAGCAACTGTTCAGCTTTTACTGATTCAGGCGGTGATGGAGATCTATAACATGTATCGGTCTCACCTTTCAGCAAAAAACATGCTAGTCCTGTTTGATGCTTTGCACGATGTAGCATCACATGCACACAAGATTAACAGCGATACTATATTGCGTTCTAAGCTTCAAGAATTTGGTTCTATGACCCAAATGCAAGACCCTCCAGTGTTACGCCTTGAGAATGAATCATACCAAATATGCCTTACCTTTTTACAGAACCTGGTTTTGGACAAGCCTCCTAGTTATGAGGAGGCTGAGGTTGAATCTCATCTTGTTCGGCTTTGTCAGGAGGTTTTGGAGTTATATATTGAAGTTGCAGGCTTTGGACAAAAATCTGAATCTTCTCATGGTAGAAAGCCTCATTGGTTAATTCCTTTAGGCTCTGGGAAGCAGAGAGAATTAGCTGCACGTTCACCTCTTATTGTGGCTACTCTGCAGGCTATTTGTAGTTTGGGAGATATTTCTTTTGAGAAGAACCTGTCTCATTTTTTCCCTCTTCTCTCTAGCTTGGTAAGTTGTGAACACGGATCAAACGAGGTCCAAGTTGCTCTCAGTGATATGCTTAGTTTATCAGTTGGGCCTGTTTTGCTACAGTCATGTTGA 5349 0.4231 MASLEADSRLSQVLVPALEKIIKNASWRKHAKLSHECKSIIERLSHNSSQNQQLQPGSPSDAEPENSVPGPIHDGGPVEYSFDESESILRPLINAAGSGVLKIADPAVDAIQKLIARGYLRGEADPGGTAPESKLLSNLIESVCKCHDLGDEAMELLVIKTLLSAVTSISLRIHGDCLLLIVRTCYDIYLVSKNMVNQTTAKASLIQMLVIVFRRMEADSTTVPIQPIVVAELMEPAGKSDVDNSMAHFVQGFITKIMQDIDGVLKPVTPSGKVSLLGGHDGAFETTTVETTNPTDLLDSTDKDMLDAKYWEISMYKTALEGRKGELVDGEIMERDDDLEVQIGNKLRRDAFLVFRALCKLSMKTLPKEASGDPQLMKGKIVALELLKILLENAGAVFRTSERFLDAIKQYLCLSLLKNSASTLLIVFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRVLENVSQPNFQQKMIVLRFLEKLCLDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGVPPGVTTTLLPPQEATLKLEAMKSLVAVLKSMGDWMNKQLRIPDPHSAKKVEAADNGPEAGGFTMVNGNGEDPVEGSDSQSEIPNDASDVSTIEQRRAYKLELQEGISLFNRKPKKGIEFLINANKVGDSPEDIAAFLKDASGLNKTLIGDYLGEREELPLKVMHAYVDSFNFQGMEFDEAIRVFVQGFRLPGEAQKIDRIMEKFAERYCKCNLKAFSSADTAYVLAYSVILLNTDAHNPTVKNKMSADDFIRNNRGIDDGKDLPEEYLRSLFERISRNEIKMKENDVAPQQRPAVNPNRLLGLDSILDIVILKRGEESHMETSDDLIRHMQEQFKEKARKTESVYYAATDVVILRFMIEVCWAPMLAAFSVPLDQSDDEVVISLCLEGFRYAIHVTSVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNIDAIKAIVAIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQNDLEKTKQAKSTILPVLKKKGPGRMQYAAATLMRGSYDSNVSGAVTSEQVNNLVSNLTMLEQVGSSEMSRIFTRSQKLNSEAIIDFVKALCKVSMEELRSPSDPRVFSLTKMVEIAHYNMNRIRLVWSSVWHVVSDFFVTIGCSANLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIVRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNKEVSLNAIAFLQFCATKLAEGDLGSSSRNKNKEASGKISSPSPRTGKEEKQDNGEVTDKDDHLYFWFPLLAGLSELSFDPRPEIRKRALEVLFETLRNHGHLFSLPLWEKVFESVLFPIFDYVRHAIDPSGSSSQVNEVETDGELDQDAWVYETCTLALQLVVDLFVNFYDTVNPLLKKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGELFSGEKWLEVVFSLKAAANATLPNFSFLENEDFAARNHDHASTAEDDTDLAESGSPDDLEGLRIRRLYAYLTDAKCRATVQLLLIQAVMEIYNMYRSHLSAKNMLVLFDALHDVASHAHKINSDTILRSKLQEFGSMTQMQDPPVLRLENESYQICLTFLQNLVLDKPPSYEEAEVESHLVRLCQEVLELYIEVAGFGQKSESSHGRKPHWLIPLGSGKQRELAARSPLIVATLQAICSLGDISFEKNLSHFFPLLSSLVSCEHGSNEVQVALSDMLSLSVGPVLLQSC* 1783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01292 1782 MobiDBLite consensus disorder prediction 47 62 - -
Rops4g01292 1782 FunFam Brefeldin A-inhibited guanine nucleotide-exchange 1 694 812 - -
Rops4g01292 1782 FunFam Brefeldin A-inhibited guanine nucleotide-exchange protein 1 603 692 - -
Rops4g01292 1782 MobiDBLite consensus disorder prediction 47 76 - -
Rops4g01292 1782 MobiDBLite consensus disorder prediction 566 611 - -
Rops4g01292 1782 Pfam Domain of unknown function (DUF1981) 1165 1247 IPR015403 -
Rops4g01292 1782 Gene3D - 693 809 IPR023394 -
Rops4g01292 1782 ProSiteProfiles SEC7 domain profile. 612 799 IPR000904 GO:0005085|GO:0032012
Rops4g01292 1782 Gene3D - 612 692 - -
Rops4g01292 1782 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 74 1647 - -
Rops4g01292 1782 MobiDBLite consensus disorder prediction 593 611 - -
Rops4g01292 1782 SUPERFAMILY Sec7 domain 616 807 IPR035999 GO:0005085|GO:0032012
Rops4g01292 1782 Pfam C-terminal region of Mon2 protein 1346 1424 IPR032817 -
Rops4g01292 1782 MobiDBLite consensus disorder prediction 1303 1337 - -
Rops4g01292 1782 Pfam Dimerisation and cyclophilin-binding domain of Mon2 6 219 IPR032629 -
Rops4g01292 1782 CDD Sec7 619 801 IPR000904 GO:0005085|GO:0032012
Rops4g01292 1782 MobiDBLite consensus disorder prediction 1303 1323 - -
Rops4g01292 1782 SUPERFAMILY ARM repeat 382 1503 IPR016024 -
Rops4g01292 1782 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 348 506 IPR032691 -
Rops4g01292 1782 Pfam Sec7 domain 620 801 IPR000904 GO:0005085|GO:0032012
Rops4g01292 1782 Pfam BIG2 C-terminal domain 1573 1771 IPR046455 -
Rops4g01292 1782 SMART sec7_5 616 801 IPR000904 GO:0005085|GO:0032012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01292 Rops-Chr4 34274580 34287049 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01292 K18442 - gmx:100798955 3154.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02159 8 49984222 49997891 Rops4g01292 4 34274580 34287049 PCT