Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01922 ATGGGCGATTTCAACCTCGCCCTGGTGATCGTGGCCATCGTGGTGTGCGTGATCGTGTTCCTCTTCAATGTGTACCTTCTCGTGAACTACCAGCACCCTGATGACGTTAACCAAGCGTATTTCCCCAAATTCGTCGTCGTTTTCGGACTTTCGGTGGCCGCCATCTCCATCTTGATGCTCCCCGCTGACGTGGCGAACCGGCAAGCGTGCCGGCACGCTATTTATAATGGCGCGTGTAACCTCACGCTTCCTATGAAGGATCTCTGGCTTGTCGTTTACATCGTCGATGCCGTTCTCGTCTTCTTCGTCATTCCCTTTGCAATGTTCTACTATGAAGGTGACCAGGACAAGAGTGTGGGTAAAAGGATTAAGAGTGCGTTGTTGTGGATGGTGACGACGGCTATAGTTTGCGCTCTCGTTCTGGGTATTTTGTATGGGCTTGTTGGTAAGGTGGACTTTACTGTTAGGCATCTCTCTTCGTCGACAAATTCATTTCCTAGCTCATGGAGCTTCAATAGTGGTCAAGAATGTATCGGAAGTGGTGTCCATCAGTGTTCTGCGTACTCTGCCAGTCCTTCATCAGAGAAAACATGGACCATGCGTGCTACCTTTCCAGAATATGTTGTAGCTCTTGCTACTATTGTCGGATCTGTGCTTTTTGCTATATTTGGCGGTGTGGGTATTGCTTGCCTTCCATTAGGACTTATATTTTCATTTATCCGGCGTCCAAAGGCTGTTATCACCCGCTCACAGTATATCAAGGAAGCAACTGAACTGGGTAAAAAAGCAAAAGAATTGAAGAAAGCAGCTGAGGCACTCCATCAGGAAGAAAGAAGTGGTTCAAAGGGTAGAAAATTTCGTAAAAATGTGAAGGAAGTAGAAAAGGAGTTGTTTCAATTAGAAGAAGATGTAAAGCTTCTTGAAGAGATGTATCCACAAGGGGAAAAGGCTGAGACAACATGGGCCCTAACAGTTCTTGGTTATCTGGCAAAATTTGTTTTGGGAATTTTAGGGTTGATTGTTTCAGTGGCATGGGTTGCTCATATTATTATCTATCTATTAATTGATCCTCCTCTTTCTTCTTTCCTGAATGAAGTTTTCATCAAGCTAGATGATATCTGGGGTCTTCTTGGCACAGCTGCATTTGCATTTTTCTGCTTCTACCTTCTCCTGGCCGTGATTGCTGGTGCCATGATGCTTGGGCTGAGACTAGTTTTCATTACTATACATCCCATGAAGTGGGGAGCAACTCTGATGAACTCTTTTCTGTTTAATGTGGGGCTTATCCTTCTTTGTTCCATTAGTGTGATCCAGTTTTGCTCCACAGCATTTGCCTACTATGCTCAAGCAACTGCAGCCCAGGAAATATTTGGCCACACTTTGGAGTCTCTTCGTGGAATTAAATATTTGTACAAGTACAACGTATTTCAAATTGCATTTGTTGTTTTGGCCGGATTGACCTTTGTGTATTATGCTGCCTTTGGATGGAGAAGAAAAAAGCCTAGCGGCAGGTTCCAATTGTCTACATGA 1530 0.4444 MGDFNLALVIVAIVVCVIVFLFNVYLLVNYQHPDDVNQAYFPKFVVVFGLSVAAISILMLPADVANRQACRHAIYNGACNLTLPMKDLWLVVYIVDAVLVFFVIPFAMFYYEGDQDKSVGKRIKSALLWMVTTAIVCALVLGILYGLVGKVDFTVRHLSSSTNSFPSSWSFNSGQECIGSGVHQCSAYSASPSSEKTWTMRATFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSFIRRPKAVITRSQYIKEATELGKKAKELKKAAEALHQEERSGSKGRKFRKNVKEVEKELFQLEEDVKLLEEMYPQGEKAETTWALTVLGYLAKFVLGILGLIVSVAWVAHIIIYLLIDPPLSSFLNEVFIKLDDIWGLLGTAAFAFFCFYLLLAVIAGAMMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCSTAFAYYAQATAAQEIFGHTLESLRGIKYLYKYNVFQIAFVVLAGLTFVYYAAFGWRRKKPSGRFQLST* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01922 509 Coils Coil 283 310 - -
Rops8g01922 509 PANTHER LIMR FAMILY PROTEIN DDB_G0283707-RELATED 1 508 - -
Rops8g01922 509 Pfam LMBR1-like membrane protein 9 289 IPR006876 -
Rops8g01922 509 Pfam LMBR1-like membrane protein 278 487 IPR006876 -
Rops8g01922 509 Coils Coil 249 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01922 Rops-Chr8 43828539 43839658 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01922 K14617 - gmx:100816750 920.228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g01922 8 43828539 43839658 Rops8g01922 8 43828539 43839658 ECH
Rops8g01922 8 43828539 43839658 Rops4g00987 4 26746997 26757302 PCT