Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00987 ATGGGCGATTTCAACCTTGCTCTGGTGATCGTTGCGATTGTGGTGTGCATTATCGTGTTCCTCTTCAATGTGTACCTTCTTGTTAACTACCAACACCCCGATGACGTGAACCAGGCTTACTTCCCCAAATTCGTCGTCGTTTTGGGGCTTTCCGTGGCCGCCATCTCCGTCCTCATGCTCCCTGCTGACGTGGCAAACCGTCAGGCATGTCGCCACTCTATTTACAACGGCGCGTGTAATCTCACGCTCCCAATGAAGGATCTCTGGCTCGTTGTTTACATCGTCGATGCTATTCTTGTCTTCTTCGTTATCCCATTCGCCATGTTCTACTACGAAGGAGACCAAGACAAGAGTGTTGGCAAACGGATTAAGAGCGCGTTGTTGTGGATGGTGACCACTGCTATCGTCTGTGCTCTCGTTTTGGGTATTTTGTATGGGCTTATTGGGAAGGTGGATTTTACTGTGAGGCATCTCTCTTCTTCTACAAGCCCATTTCCTAGCTCATGGGAATTCAATCAGGGTCAACAATGTATCGGAAGTGGCTCCTCCCGGCAGTGTTCTGCGTACTCTGCTAGTCCTTCGTCAGAGAAAACATGGACCATGCGTGCTACCTTTCCAGAATATGTAGTTGCTCTTGCTACTATTGTTGGATCTGTGCTTTTCGCTATATTTGGTGGTGTTGGTATTGCTTCTCTTCCATTGGGACTTATATTTTCATTTATTCGGCGTCCAAAGGCTGTTATCACTCGTTCACAATATATCAAGGAAGCAACTGAACTGGGTAAAAAAGCGAAAGAACTGAAGAAAGCAGCTGAGTCACTTCATCAGGAAGAAAGAAGTGGTTCAAAGGGTAGGAAATTTCGTAAAAATGTGAAAGCAGTAGAAAAGGAGTTGTTTCAATTAGAAGAAGATGTAAAGCTTCTTGAGGAGATGTATCCACAAGGGGAACAGGCTGAGACAACATGGGCACTAACAGTTCTTGGGTATCTGGCAAAACTTGTTTTGGGAATTTTAGGGTTTATCGTCTCTGTGGCATGGGTTGCTCATATCATTATCTATCTATTAATTGATCCTCCTCTTTCTCCTTTCCTGAATGAAGTTTTCATCAAGCTGGATGATATCTGGGGTCTTCTGGGTACAGCTGCATTTGCATTCTTCTGCTTCTACCTTCTCCTTGCTGTGGTTGCTGGTGCCACGATGCTTGGGCTGAAAGTAGTTTTTATTACCATACATCCCATGAAGTGGGGAGCGACTCTCATGAACTCTTTTCTGTTCAATGTGGGGCTTGTACTTCTTTGTTCCATTAGTGTGATCCAGTTCTGCTCCACAGCATTTGCCTACTATGCTCAAGCAACCGCAGCACAGGAAATATTTGGCCACACTTTGGAGTCTCTCCGTGGAATTAAATATTTGTACAAGTACAACGTATTTCAGATTGCATTTGTTGTTTTGGCTGGATTGACTTTTGTGTATTATGCTGCCTTTGGATGGAGAAGAAAGAAGCCTAGTGGCAGGTTCCAATTGTCTACATGA 1533 0.4462 MGDFNLALVIVAIVVCIIVFLFNVYLLVNYQHPDDVNQAYFPKFVVVLGLSVAAISVLMLPADVANRQACRHSIYNGACNLTLPMKDLWLVVYIVDAILVFFVIPFAMFYYEGDQDKSVGKRIKSALLWMVTTAIVCALVLGILYGLIGKVDFTVRHLSSSTSPFPSSWEFNQGQQCIGSGSSRQCSAYSASPSSEKTWTMRATFPEYVVALATIVGSVLFAIFGGVGIASLPLGLIFSFIRRPKAVITRSQYIKEATELGKKAKELKKAAESLHQEERSGSKGRKFRKNVKAVEKELFQLEEDVKLLEEMYPQGEQAETTWALTVLGYLAKLVLGILGFIVSVAWVAHIIIYLLIDPPLSPFLNEVFIKLDDIWGLLGTAAFAFFCFYLLLAVVAGATMLGLKVVFITIHPMKWGATLMNSFLFNVGLVLLCSISVIQFCSTAFAYYAQATAAQEIFGHTLESLRGIKYLYKYNVFQIAFVVLAGLTFVYYAAFGWRRKKPSGRFQLST* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00987 510 Pfam LMBR1-like membrane protein 284 488 IPR006876 -
Rops4g00987 510 Pfam LMBR1-like membrane protein 9 283 IPR006876 -
Rops4g00987 510 Coils Coil 284 311 - -
Rops4g00987 510 Coils Coil 250 277 - -
Rops4g00987 510 PANTHER LIMR FAMILY PROTEIN DDB_G0283707-RELATED 1 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00987 Rops-Chr4 26746997 26757302 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00987 K14617 - gmx:100796998 909.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g01922 8 43828539 43839658 Rops4g00987 4 26746997 26757302 PCT