Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01758 ATGTCTACTGGAAAACTAACACAGCAACATCTTCCCAGACCATGGAAACTCCTTGTCTTCTTTAGCATAGCTCTAGTCACTTCCATCATTTTACTCATCTCCCTCTCCCACTCCACCAATTTCCATCACAAACCATTCAAACACTTAGTTCAACGCCACACAATCAAACACACTCTTCACACCTCCACCACCATCGAAGAACAACCCACCAACATCTCCCACATCTTCTTCGGCATCGCCAGCTCCGCCAAGACCTGGCCCAAGCGCCGCCCCTACGTCGATCTCTGGTGGAAGCCAAACGTCACCAGAGGCTTCCTCTGGTTGGACGATAAGCCGCCGGAAAACCAGACCTGGCCGGAGATTTCGCCGCCGTTCAGAGTCTCCGGCAACACCTCGTCGTTCAAGTACACCTGCTCGTACGGTAACCGGTCGGCAATTCGGATAGCGCGCATAGTGAAGGAGACCTTCGATTTAGGACCGCACAACAACGTGAGGTGGTTCGTGATGGGTGACGATGACAGTGTGTTCTTCACCGACAACCTCGTTACGGTGTTGTCGAAATATGATCACAACCAAATGTACTATATTGGCGCGAACTCAGAGAGTGTGGAGCAGGATGTTATATTCTCTTACGCCGTCGCGTACGGCGGCGGAGGGTTCGCCATCAGCTACCCTTTAGCGGCTGAGCTGACGAGAATTTTGGATGGTTGTATAGACCGTTACGCTCAACTCTACGGTGGTGACCAGAAGGTTCAAGCTTGTATCAGTGAGATTGGTGTGCCATTAACCAAAGAGCTTGGCTTTCATCAGGTTGATATACGTGGGAATCCATTTGGGTTCTTAGCAGCGCACCCAGTGGCACCACTGGTGTCACTACATCATTTGGAAACTGTGGATCAATTGTTTCCAAGCCTGACCAAGTTTGAGTCCATTAAAAAATTGGTTGGGGCATATGAGATGGATCCGGGTCGGATCTTGGAGCACAGTTTTTGCTATGACCTAAAACGGAACTGGTCGGTTTCGGTGTCGTGGGGTTACAGCGTGCAGTTGTATTTGTCATTGGTGACAGCAAAGGAGTTGGAAAAGGCGGTTGGGACGTTTCAGACGTGGCAGAGCTTAAGCGACGGACCTTTTGTGTTCAACACCCGACCCGTGAGCAGCGACCCGTGTGAGAGACCGGTTTTGTATTTTCTGGATCGGGTTGATAATATGGGTCCGGGTCAGACCCGATCCAGGTACACTAGGTACGTTGACGCATTGGGGAAAGAGTGTGGAAGAGTTGACTTGGTTGGAGTCCTTGATGCAGTACAGTCGGTCAATGTCTCTGCCCCTTACTTTACGCCAGACTTGTGGAAAAAGGCACCGCGTAGACAATGCTGTGAGATAATCAACGGCACAGAAGGTGTCGACAATGTGGTCCAGATCAAGATCAGAGGCTGCCATCGCTTTGAGAGTGTGACTCCTCCCTAG 1470 0.5068 MSTGKLTQQHLPRPWKLLVFFSIALVTSIILLISLSHSTNFHHKPFKHLVQRHTIKHTLHTSTTIEEQPTNISHIFFGIASSAKTWPKRRPYVDLWWKPNVTRGFLWLDDKPPENQTWPEISPPFRVSGNTSSFKYTCSYGNRSAIRIARIVKETFDLGPHNNVRWFVMGDDDSVFFTDNLVTVLSKYDHNQMYYIGANSESVEQDVIFSYAVAYGGGGFAISYPLAAELTRILDGCIDRYAQLYGGDQKVQACISEIGVPLTKELGFHQVDIRGNPFGFLAAHPVAPLVSLHHLETVDQLFPSLTKFESIKKLVGAYEMDPGRILEHSFCYDLKRNWSVSVSWGYSVQLYLSLVTAKELEKAVGTFQTWQSLSDGPFVFNTRPVSSDPCERPVLYFLDRVDNMGPGQTRSRYTRYVDALGKECGRVDLVGVLDAVQSVNVSAPYFTPDLWKKAPRRQCCEIINGTEGVDNVVQIKIRGCHRFESVTPP* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01758 489 PANTHER FRINGE-RELATED 15 484 - -
Rops8g01758 489 Gene3D - 61 317 - -
Rops8g01758 489 FunFam Fringe-related protein-like 62 319 - -
Rops8g01758 489 Pfam Protein of unknown function, DUF604 205 460 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01758 Rops-Chr8 39373836 39377015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01758 68 488 Glycosyltransferase AT2G37730 62.796 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01758 - - jre:109007653 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g01758 8 39373836 39377015 Rops8g01758 8 39373836 39377015 ECH
Rops11g03554 11 67932906 67937919 Rops8g01758 8 39373836 39377015 ECH