Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01728 ATGCCTGAAATGGAGTACGAGGACCGCTTCAGACAGACCCAGAGACCAAAATATGATTGCCTTCTTTTTGATTTGGATGATACTTTGTATCCACTGAGCTGTGGTATCGCAAAAGCATGTGGCCAAAATATTAAAGACTATATGGTTGAGAAGCTTGGCATAAAGAGAAGCATAATTGATGAGTTGTCCACCCTTCTCTACAAGAACTATGGAACAACTATGGCTGGTCTAAGGGCAATAGGATATGACTTTGACTATGATGAATATCACAGTTTTGTTCATGGGAGATTACCTTATGAGAACTTGAAACCAGACCCAGTTCTAAGGAACCTCTTACTGAGCCTACCCTATAGGAAACTTATCTTCACAAACGCAGACAAAGTCCATGCAGTTAAGGCACTTAGCAGGCTTGGATTAGAAGACTGCTTTGAAGGAATCATATGCTTTGAGACTCTTAATCCCATTCACAAGAGCACTGTTTCTGATGATGAAGATGACATTGAATTTATTGGTTCAAGCACAGCCAAACCAACCACAAGTAACAGTGCTAGTAGTAACTCTCAAATCTTTGACATCATTGGACATTTCAATAAACCCAATCCCACTACAGTTTTACCAAAGACACCAATTATCTGCAAACCATCAGAGAATGCCATTGAGCTGGCTCTCAAGATAGCCAACCTTAACCCACATAGAACTTTGTTCTTTGAGGATAGTGTCCGCAACATACAAGCTGGAAAACGTGTGGGTCTTGACACTGTGCTGGTTGGTACATCTCAGAGAATCAAAGGTGCAGATTATGCCTTAGAAAGCATCCACAACCTTAGAGAGGCATTGCCTGAATTATGGGAAGCTGACATAAAATCAGAAGTTGCTTATCCTGGCAACCTTGCTGTGGAGACATCTGTTACTGCTTAG 918 0.4129 MPEMEYEDRFRQTQRPKYDCLLFDLDDTLYPLSCGIAKACGQNIKDYMVEKLGIKRSIIDELSTLLYKNYGTTMAGLRAIGYDFDYDEYHSFVHGRLPYENLKPDPVLRNLLLSLPYRKLIFTNADKVHAVKALSRLGLEDCFEGIICFETLNPIHKSTVSDDEDDIEFIGSSTAKPTTSNSASSNSQIFDIIGHFNKPNPTTVLPKTPIICKPSENAIELALKIANLNPHRTLFFEDSVRNIQAGKRVGLDTVLVGTSQRIKGADYALESIHNLREALPELWEADIKSEVAYPGNLAVETSVTA* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01728 305 SFLD Haloacid Dehalogenase 13 285 - -
Rops8g01728 305 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 9 304 - -
Rops8g01728 305 SFLD C1.5.3: 5'-Nucleotidase Like 13 285 IPR010237 -
Rops8g01728 305 Gene3D - 84 283 IPR023214 -
Rops8g01728 305 Pfam Haloacid dehalogenase-like hydrolase 213 256 IPR041492 -
Rops8g01728 305 NCBIfam HAD-IA family hydrolase 209 256 IPR006439 -
Rops8g01728 305 NCBIfam pyrimidine 5'-nucleotidase 19 256 IPR010237 -
Rops8g01728 305 SUPERFAMILY HAD-like 16 283 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01728 Rops-Chr8 38721302 38723130 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01728 K07025 - gmx:100796466 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g01728 8 38721302 38723130 Rops8g01728 8 38721302 38723130 ECH
Rops8g01728 8 38721302 38723130 Rops4g00018 4 565803 568905 PCT