Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01148 ATGGAAAAATCATCCAAATTTGATGAAAATTCTGATGTGGGTTATCACCCTTCACCTTCTGTGGATCGTTCATCCACTGATACTACTACTTTCTCCAGATTGAGTGGTGATTCTTTTGCATATTGTCGAACATGGACAAGTTCAGAGACATCAAATTCAAACTTCTCAGACACTGTAGATGACAGCAGCTATGCCAGTGAACCTTCACCTTCTCGGTGGATGGCTAAACAAGTTGCTCTTTCCAAAATGAAGCTACGGAAGCATTCAATGGATGAAAAACTTGATGACATTGATATGGATTCAGCTGAGCTTGAAATGATGAAGGAAAGATTTGCAAAACTTCTGTTGGGAGAAGACATGTCTGGTGGTGGGAAAGGTGTTTGCACTGCAGTTACAATCTCAAATGCCATTACCAATCTCTATGCAACTATATTTGGACAAAATTTAAAGTTGGAGCCACTGAAGCCTGAGAAGAAGGCTATGTGGAAAAGGGAAATGAAGGTTCTTCTATCAGTGTGTGATTACATACAAGAATTTGCCCCAACAGCACAATATTTAGAAGATGGCACAATTGTGGAGATGATGAAAAGCAGGCCAAGATCAGACATCTATATCAACCTCCCTGCACTGCAGAAGCTTGACACAATGCTCATAGAAATATTAGATACTTTTGAGGATACTGAATTTTGGTATGCAGAGAACATACAAGGGAATTCAACTAGATTACGTGCAGCCTCATTTCGAAAGATTGTTCCAAGGAAAGATGAGAAATGGTGGTTGCCAGTTCCTTGTGTTCTCCCTGGTGGCCTCTCTGATAAGTCAAGGAAGCACCTGATGGAGAAAAGGGATTGTGCTAATCAAATTCACAAAGCAGCCATGGCAATAAATAGCAATGCTCTTGCAGAAATAGATATCCCTGAAACATATATTGATGATCTTCCCAAGCTGAGATACTATTGCCAAGTGATTGAGGATTCCATTAAATGTGATCCCATAAAGCAAATGTCTTGGAATTTATCATCAAATTTCATAAGCCTTATATGGAAGCCAATAATAGCAGCTGAGTCATGTAGAAAACGGGATGATATAATTTCATATAAGAGTGGAAGATCAAGTATAGGGGACACAATTTACCACTATATGTCTGCTGCAGACAAGTTCTCACCCGATCACCTTCTTGATTGTCTCAAAATAAGTTCTGAACATGAAGCACTTGAGCTAGCAGACAGGGTTGAATCATCAATGTACACGTGGAGGCGTAAAGCTTGTCTGAACCATTCAAAGTCATCATGGAAAAAAGTAAAGGATCTAATGGCTGACACTGACTGTAAGGACAAAAACTACATCTTAGCTGATAGAGCAGAGACTTTGTTGTTTTGCCTGAAGCAAAGATATCCTGAACTTTCACAAACTTCTTTGGATGCATGCAAGATCCAATACAACCGGGATGTGGGGAAAGCAGTGCTTGAAAGTTATTCAAGAGTTTTAGAAGGCCTAGCATTCAATATTGTTGCTTGGATTGAAGATGTTCTTGATGTAGATAAATTAATGAGGAATAGAGATGTCTAG 1569 0.3932 MEKSSKFDENSDVGYHPSPSVDRSSTDTTTFSRLSGDSFAYCRTWTSSETSNSNFSDTVDDSSYASEPSPSRWMAKQVALSKMKLRKHSMDEKLDDIDMDSAELEMMKERFAKLLLGEDMSGGGKGVCTAVTISNAITNLYATIFGQNLKLEPLKPEKKAMWKREMKVLLSVCDYIQEFAPTAQYLEDGTIVEMMKSRPRSDIYINLPALQKLDTMLIEILDTFEDTEFWYAENIQGNSTRLRAASFRKIVPRKDEKWWLPVPCVLPGGLSDKSRKHLMEKRDCANQIHKAAMAINSNALAEIDIPETYIDDLPKLRYYCQVIEDSIKCDPIKQMSWNLSSNFISLIWKPIIAAESCRKRDDIISYKSGRSSIGDTIYHYMSAADKFSPDHLLDCLKISSEHEALELADRVESSMYTWRRKACLNHSKSSWKKVKDLMADTDCKDKNYILADRAETLLFCLKQRYPELSQTSLDACKIQYNRDVGKAVLESYSRVLEGLAFNIVAWIEDVLDVDKLMRNRDV* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01148 522 FunFam Rop guanine nucleotide exchange factor 14 389 522 - -
Rops8g01148 522 MobiDBLite consensus disorder prediction 1 33 - -
Rops8g01148 522 MobiDBLite consensus disorder prediction 17 33 - -
Rops8g01148 522 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 367 518 IPR005512 GO:0005085
Rops8g01148 522 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 103 316 IPR005512 GO:0005085
Rops8g01148 522 FunFam Rop guanine nucleotide exchange factor 2 360 480 - -
Rops8g01148 522 Gene3D PRONE domain, subdomain 1 481 516 - -
Rops8g01148 522 Gene3D PRONE domain, subdomain 1 96 337 - -
Rops8g01148 522 Gene3D PRONE domain, subdomain 2 367 480 - -
Rops8g01148 522 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 37 521 IPR038937 GO:0005085
Rops8g01148 522 ProSiteProfiles PRONE domain profile. 94 522 IPR005512 GO:0005085
Rops8g01148 522 MobiDBLite consensus disorder prediction 48 69 - -
Rops8g01148 522 FunFam Rop guanine nucleotide exchange factor 14 96 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01148 Rops-Chr8 24195867 24199463 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01148 - - gmx:100806086 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g01148 8 24195867 24199463 Rops8g01148 8 24195867 24199463 ECH
Rops8g01148 8 24195867 24199463 Rops4g01483 4 37583054 37586597 PCT