Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01142 ATGGTTTCTTCACTTGGAGCTACGTGTGCTGTGTGCTATGTGTTTATGGTTCTTTTCACTTTGAGTTTGGCTGGGGATATAGTACACCCTGACAGTGTTGCTCCCAAGAGGCCTGGTTGTGACAACAACTTTGTTCTGGTTAAAATACCAACTTGGATTGATGGTGTGGAAAACTGTGAGTATGTTGGTGTTGGCGCAAGATTTGGCCCTACGTTGGAATCGAAAGAAAAACGCGCTAACCATACTAGAGTTGCCATTGTGGACCCTCCTGATTGTTGTAGCAAGCCTAAGAATAAGCTCACCGGCGAGATTATTTTGGTGCACCGAGGACAATGTAGTTTCACAACCAAGGCAAATATAGCTGAAGAAGCTGGTGCTTCAGCCATCATCATTATAAATAACCGTGCAGAACTTTTCAAGATGGTTTGTGAAGAGAATGAAACTGACATTGATATTGGAATACCTGCTGTCATGCTTCCACAAGATGCTGGTGAAAACTTGGAAAATCATATACTAAACAAGTCCACGGTATCTGTGCAGTTATACTCTCCGCTGCGTCCAGCGGTTGATGTTGCAGAAGTGTTTTTATGGCTTATGGCTGTTGGTACCATTCTCTGTGCTTCTTATTGGTCTGCCTGGACTGCCAGAGACGCTGCTATTGAGCGAGAGAGGCTATTAAAGGTTGCTTCAGACGAATATCTAAATACAGAGAACGCTGGTTCCAGTGCTTTTGTGGAAATCAGTACTGCAGCAGCAATTTCATTTGTTGTAATTGCTTCTTGTTTCTTGGTTATGCTTTACAAATTGATGGCATTCTGGTTTATTGAAGTTCTGGTGGTTCTATTCTGCATTGGTGGAGTTGAGGGACTGCAAACTTGCTTGGTGGCTCTGTTATCATGTTTCAGATGGTCTCAACATGCTGCACAAACATTCGTGAAAATACCCTTCTTTGGAGCTGTATCATATCTGACACTTGCAGTTACTCCCTTCTGCATAGTGTTTGCTGTGGTTTGGGGAGTTTATCGTCGTGTATCGTTTGCTTGGATTGGTCAAGATATTCTTGGTATTGCATTGATAATTACAGTTCTTCAGATTGTCCACATACCAAATCTCAAGGTTGGAACTGTTCTTCTCAGTTGTGCCTTCCTATATGACATTTTCTGGGTGTTTGTCTCTAAACGGTTGTTCCATGAGAGTGTGATGATAGTGGTAGCTCGAGGTGATAGGAGTGGAGAAGATGGTATCCCCATGCTACTCAAGATACCACGTTTGTTTGATCCTTGGGGTGGTTACAGTGTCATTGGTTTCGGGGACATAATCTTACCAGGGCTTGTAGTAGCATTTTCACTAAGGTATGATTGGTTAGCAAAGAGGAACCTTCGGGCTGGATACTTCTTGTGGGCAATGAGTGCTTATGGTTTAGGTCTCCTTATCACATATGTGGCTTTGAACTTGATGGATGGGCATGGTCAACCAGCTTTGCTTTATATAGTCCCATTTACACTTGGAACCTTTTTGTCATTGGGAAAGAAGAGAGGTGAACTCAAGATTTTATGGACAAGAGGGCAACCAAGAATGCCTTGCCCTCACATCAAAGAGGATCATCAATCAATGGACCAGTAA 1623 0.4288 MVSSLGATCAVCYVFMVLFTLSLAGDIVHPDSVAPKRPGCDNNFVLVKIPTWIDGVENCEYVGVGARFGPTLESKEKRANHTRVAIVDPPDCCSKPKNKLTGEIILVHRGQCSFTTKANIAEEAGASAIIIINNRAELFKMVCEENETDIDIGIPAVMLPQDAGENLENHILNKSTVSVQLYSPLRPAVDVAEVFLWLMAVGTILCASYWSAWTARDAAIERERLLKVASDEYLNTENAGSSAFVEISTAAAISFVVIASCFLVMLYKLMAFWFIEVLVVLFCIGGVEGLQTCLVALLSCFRWSQHAAQTFVKIPFFGAVSYLTLAVTPFCIVFAVVWGVYRRVSFAWIGQDILGIALIITVLQIVHIPNLKVGTVLLSCAFLYDIFWVFVSKRLFHESVMIVVARGDRSGEDGIPMLLKIPRLFDPWGGYSVIGFGDIILPGLVVAFSLRYDWLAKRNLRAGYFLWAMSAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKILWTRGQPRMPCPHIKEDHQSMDQ* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01142 540 Gene3D - 39 184 - -
Rops8g01142 540 SMART psh_8 243 512 IPR006639 GO:0004190|GO:0016020
Rops8g01142 540 Pfam Signal peptide peptidase 243 522 IPR007369 GO:0004190|GO:0016020
Rops8g01142 540 FunFam Signal peptide peptidase-like 3 46 185 - -
Rops8g01142 540 Pfam PA domain 90 167 IPR003137 -
Rops8g01142 540 PANTHER SIGNAL PEPTIDE PEPTIDASE 69 528 IPR007369 GO:0004190|GO:0016020
Rops8g01142 540 SUPERFAMILY PA domain 99 139 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01142 Rops-Chr8 24086578 24093342 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01142 K09597 - gmx:100808921 974.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g01142 8 24086578 24093342 Rops8g01142 8 24086578 24093342 ECH
Rops8g01142 8 24086578 24093342 Rops4g01492 4 37712931 37721889 PCT