Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01492 ATGGTTTCACTAGGAGCTATATTTACTGTGGCTTATGTGTTCTTGCATGTTGTTACTTTGGTTTTGGGTGGTGATATAGTTCACCATGATGATGTTGCTCCAAGAAGGCCTGGTTGTGAGAACAACTTTGTTCTGGTCAAAGTCCCCACTTGGATTGATGGTGTGGAAAACAGTGAGTATGTTGGTGTTGGTGCAAGATTTGGCCCTACATTGGAATCGAAAGAAAAACGTGCCAATCATACTAGAGTTGTCATGGCTGATCCTCCTGATTGTTGTAGCAAGCCTAAGAATAAGCTCACCAGCGAGATCATCTTGGTGCACCGAGGAAAATGTAGTTTCACAACCAAGGCAAATATAGCTGATGAAGCTGGTGCCTCAGCCATCCTCATAATTAACTACCGTACAGAACTTTTCAAGATGGTTTGTGAAGAAAATGAAACTGATGTTGATATTGGAATACCTGCTGTCATGCTTCCACAATATGCTGGATTGAACTTGGAAAGGCATATAAAAAACAACTCCACAGTGTCCATACAGTTATACTCTCCACTGCGTCCATTGGTTGATGTTGCGGAAGTGTTTTTGTGGCTTATGGCTGTTGGAACCATTTTATGTGCTTCTTATTGGTCTGCCTGGACTGCCAGAGAAGCGGCTATTGAGCAAGAGAAGCTTTTAAAGGATGCTTCAGATGAATATGTTAGCGAAGAAAATGCTGGATCCAGTGGTTATGTGGAAATCAGTACTTCAGCTGCAATTTTATTCGTTGTGATTGCTTCTTGTTTCTTGGTTATGCTGTACAAATTAATGTCATTCTGGTTTGTTGAAGTTCTGGTGGTTCTGTTTTGCATTGGTGGGGTAGAGGGACTGCAAACTTGTTTGGTGGCTTTGTTATCATGTTTCAGATGGTTTCAACATCCTGCACAAACATTTGTGAAGATACCCTTCTTTGGAGCTGTCTCATATCTGACTGTTGCTGTCACTCCCTTCTGCATAGTATTTGCTGTAGCTTGGGCAGTTTATCGCCATACATCAATTGCTTGGATTGGTCAAGATATTCTTGGTATAGCATTGATAATTACAGTTCTTCAGATTGTTCGCATACCAAATCTCAAGGTTGGAACTGTTCTTCTCAGTTGTGCCTTCCTATATGACATCTTATGGGTGTTCGTCTCTAAATGGTGGTTCCATGAGAGTGTGATGATAGTGGTAGCTCGAGGTGACAAGAGTGGAGAAGATGGTATCCCCATGCTACTCAAGATACCACGTTTGTTTGATCCTTGGGGTGGTTACAGCATCATTGGTTTTGGGGACATAATCTTACCAGGACTTCTAGTAGCATTTTCACTAAGGTATGATTGGTTGGCAAAGAAGAACCTTCGTGCTGGATACTTCTTGTGGGAAATGACTGCTTATGGTTTAGGTCTCCTCATCACATATGTGGCTTTGAACTTGATGGATGGGCATGGCCAGCCAGCTTTGCTTTACATAGTCCCATTTACACTTGGCACCTTTTTGTCACTGGGAAAGAAGAGAGGTGAGCTCAAGATTTTATGGACAAGAGGAGAACCAGAAAGGCCTTGCCCGCATATCCAAGATGATAACCAATCAATTAACCACCACCATTGA 1626 0.4219 MVSLGAIFTVAYVFLHVVTLVLGGDIVHHDDVAPRRPGCENNFVLVKVPTWIDGVENSEYVGVGARFGPTLESKEKRANHTRVVMADPPDCCSKPKNKLTSEIILVHRGKCSFTTKANIADEAGASAILIINYRTELFKMVCEENETDVDIGIPAVMLPQYAGLNLERHIKNNSTVSIQLYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWTAREAAIEQEKLLKDASDEYVSEENAGSSGYVEISTSAAILFVVIASCFLVMLYKLMSFWFVEVLVVLFCIGGVEGLQTCLVALLSCFRWFQHPAQTFVKIPFFGAVSYLTVAVTPFCIVFAVAWAVYRHTSIAWIGQDILGIALIITVLQIVRIPNLKVGTVLLSCAFLYDILWVFVSKWWFHESVMIVVARGDKSGEDGIPMLLKIPRLFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKKNLRAGYFLWEMTAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKILWTRGEPERPCPHIQDDNQSINHHH* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01492 541 SUPERFAMILY PA domain 99 137 IPR046450 -
Rops4g01492 541 SMART psh_8 242 511 IPR006639 GO:0004190|GO:0016020
Rops4g01492 541 Pfam Signal peptide peptidase 243 522 IPR007369 GO:0004190|GO:0016020
Rops4g01492 541 PANTHER SIGNAL PEPTIDE PEPTIDASE 68 530 IPR007369 GO:0004190|GO:0016020
Rops4g01492 541 Pfam PA domain 89 166 IPR003137 -
Rops4g01492 541 Gene3D - 39 183 - -
Rops4g01492 541 FunFam Signal peptide peptidase-like 3 45 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01492 Rops-Chr4 37712931 37721889 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01492 K09597 - gmx:100795197 1026.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01492 4 37712931 37721889 Rops4g01492 4 37712931 37721889 ECH
Rops8g01142 8 24086578 24093342 Rops4g01492 4 37712931 37721889 PCT