Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01138 ATGGCTATGGGAGGTTTGATTTCCAACAGAAACTTCACTTCTTTTATTGGCTCAGGAAATGTATATCAAGTGGGAAAGGATTTATCACTTCAAAGAAGGGGCATTTCTGCTGTATCTGTAGCACGGTATGGTGGCCAGATTGCAAAGGATCCTTTTGCAAGATGCCAGCATGGAATGTGTTTTCATACTAATGCACTTTTGAATGAGAAAGTTTCAAAACCAAAACTAACATTTCATGATGAAGTGGAGCATTGTTCTCCAGTGTCCTGGAAATCCATTCACTGCATGAACACGAAGCTAAAGGCTAGTAGAAGATGTCATTGCTACCATTCTTCAGATCCCTACAGCAGTAGCCCTATTGAACAAAAAGCAGTGCATGGACTCGGTATAAGCAAGCTTGGTAAGGTGAATAAGGTTCGTGTTCATTACAAGTCTGAGGAGTATGACATTTCAGAAACAAAGGTGGATCCTCTGGCATCAAATGAAGGGACAGGTGAAGCAATTCTACTGGAAGGAAATGCCCCACAAGTATCTCCTTGGTGGCAGCATTTTCCTAAGCGCTGGGTTATTGTATTGTTATGTTTTGCAGCTTTTCTACTGTGCAACATGGACCGTGTAAATATGAGCATAGCAATACTTCCAATGTCACAAGAGTTTAACTGGAACAGTGCAACAGTTGGCCTAATTCAGTCATCTTTTTTCTGGGGCTATCTACTTACTCAGATCCTTGGTGGCATATGGGCAGACAAACTTGGTGGGAAGCTAGTGCTAGGTTTTGGAGTTGTCTGGTGGTCAGTGGCAACAGTTTTAACACCCATTGCTGCAAGAATTGGACTCCCTTGTTTGCTTATCGTGCGTGCCTTTATGGGGATTGGTGAGGGTGTAGCCATGCCTGCTATGAATAATATGCTGTCCAAGTGGATTCCTGTTTCAGAGAGAAGCAGATCACTTGCCCTGGTTTATAGTGGCATGTACCTTGGTTCTGTGGTTGGCTTGGCATTCTCACCTGCTCTAATCCAAAATTTTGGGTGGCCATCAGTGTTTTACTTATTTGGATCCCTTGGAAGTATCTGGTTTGCCTTCTGGTTAAGAAAAGCATATAGCTCACCAAAAGATGACCCAGATCTCGGGGTAGAGGAGAAAAGACTCATACTTGAAGGCAATGTCTCAAAAGCACCTGTTTCAGTCATTCCTTGGAAGTTAATTTTATCAAAAGCACCTGTCTGGGCTCTTATAATCTCTCACTTCTGCCACAATTGGGGGACATTTATTCTATTAACCTGGATGCCTACTTACTACAATCAGGTTCTAAAATTCAACCTCACTGAATCTGGGCTCTTATGTGTTTTGCCATGGTTAACCATGGCGGTTTTTGCAAATATTGGAGGATGGATTGCTGACACACTAGTGAGCAAAGGCCTTTCCATAACAGCTGTTCGGAAGATCATGCAATCAATCGGGTTTCTGGGTCCTGCTTTTTTTCTTTCTCAGCTGAGCCATGTCAAAACACCTGCCATGGCAGTACTGTGCATGGCTTGCAGCCAGGGATCTGATGCATTCTCACAATCTGGTCTGTATTCCAATCACCAAGACATTGGACCACGCTATGCAGGTGTATTGCTGGGACTATCAAATACCGCAGGAGTGCTTGCTGGTGTGTTTGGTACAGCTGCAACTGGGTACATCCTCCAACGAGGTTCTTGGAATGATGTATTTAAAGTAGCTGTTGTATTGTACATAATAGGCACATTGGTCTGGAATATCTTTTCAACTGGGGAGAAGGTTCTTGACTAA 1794 0.4326 MAMGGLISNRNFTSFIGSGNVYQVGKDLSLQRRGISAVSVARYGGQIAKDPFARCQHGMCFHTNALLNEKVSKPKLTFHDEVEHCSPVSWKSIHCMNTKLKASRRCHCYHSSDPYSSSPIEQKAVHGLGISKLGKVNKVRVHYKSEEYDISETKVDPLASNEGTGEAILLEGNAPQVSPWWQHFPKRWVIVLLCFAAFLLCNMDRVNMSIAILPMSQEFNWNSATVGLIQSSFFWGYLLTQILGGIWADKLGGKLVLGFGVVWWSVATVLTPIAARIGLPCLLIVRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLALVYSGMYLGSVVGLAFSPALIQNFGWPSVFYLFGSLGSIWFAFWLRKAYSSPKDDPDLGVEEKRLILEGNVSKAPVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAVFANIGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLSQLSHVKTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWNDVFKVAVVLYIIGTLVWNIFSTGEKVLD* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01138 597 FunFam ascorbate transporter, chloroplastic isoform X2 185 374 - -
Rops8g01138 597 Pfam Major Facilitator Superfamily 194 555 IPR011701 GO:0022857|GO:0055085
Rops8g01138 597 CDD MFS_SLC17A9_like 191 590 IPR044777 -
Rops8g01138 597 Gene3D MFS general substrate transporter like domains 402 594 IPR036259 -
Rops8g01138 597 SUPERFAMILY MFS general substrate transporter 175 589 IPR036259 -
Rops8g01138 597 Gene3D MFS general substrate transporter like domains 185 374 IPR036259 -
Rops8g01138 597 ProSiteProfiles Major facilitator superfamily (MFS) profile. 190 594 IPR020846 GO:0022857
Rops8g01138 597 PANTHER SOLUTE CARRIER FAMILY 17 181 594 - -
Rops8g01138 597 FunFam ascorbate transporter, chloroplastic isoform X1 395 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01138 Rops-Chr8 24029935 24047430 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01138 1 597 Organic Solute Cotransporters AT4G00370 72.529 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01138 K08193 - gmx:100784401 1093.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g01138 8 24029935 24047430 Rops8g01138 8 24029935 24047430 ECH
Rops8g01138 8 24029935 24047430 Rops4g01495 4 37759116 37765576 PCT