Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01495 ATGACTATGATGAGTGGTTTAATTTCTAACCGTAACTTCGGTTCTTTCGTTGCCTCAGGAAGTTTTTATAGATCAGGAAAGGATCCATCACTTCAGAGAGGGGGAATTTCTGTTTCTGGTGTATATGTTACACAATATGGCGGATGGATTGCAAAGGATCCTTTCTCAAGATGCCAGCATGTGATGCTTTCTCAATGCATGAACTTAAAACTAAAGGCTAGCAGAAGAAGTCATTCTTACTTTTCTTCAGCTCCCCATTGCAGTGGCAATATTGAGCAAAGGGAAGTGTATAGGCTAGGTTTGAGCAAGAGAAAGAAACCACTACCTGAGATTGGTAAAGTGAATAAGGTCCGTGCTTGTTACAAGTCTGAAGAGAATGGCTTTGCAGAAACAAATATGGATCGACTGCCATCAATTGAGGGGACTGGTGAAGCCATTCTTTTGGAAGGAAAAATATCTCCTTGGTGGCAGCAGTTTCCTAAGCGCTGGGTTATTGTTCTGCTATGTTTTGCAGCATTTCTGCTGTGTAACATGGATCGTGTAAATATGAGCATAGCAATACTTCCAATGTCGCAAGAGTTCAACTGGAACAGTGCAACAGTTGGCGTAATTCAGTCATCTTTTTTCTGGGGTTATCTTCTTACTCAGATCATTGGTGGCATATGGGCAGACAAACTTGGTGGGAAGCTAGTGCTAGGTTTTGGAGTTGTCTGGTGGTCAATTGCAACAGTTTTAACTCCTATTGCTGCAAGACTTGGGCTGCCATGTCTGCTTATTATGCGTGCCATTATGGGAATTGGCGAGGGTGTTGCCATGCCTGCAATGAATAATATACTTTCCAAGTGGATTCCAGTAGCAGAGAGAAGCCGATCACTTGCACTAGTATATAGCGGCATGTACCTTGGTTCTGTCACAGGCTTGGCAGTCTCACCTGCGCTGATCCATAAATTTGGGTGGCCATCGGTGTTTTACTCATTTGGATCCCTTGGAAGTATCTGGTTTGCCTTGTGGTTGAGAAAAGCATACAGCTCACCAAAAGAAGATCCAGATCTCGGGGAGGAAGAGAAAAGGCTCATACTTGGAGGCAGCATATCAAAAGAATCTGTGACAGTTATTCCTTGGAAATTAATTTTATCAAAAGCACCTGTCTGGGCTTTAATAATCTCTCACTTCTGCCACAATTGGGGGACATTTATTCTCTTAACCTGGATGCCTACGTACTACAATCAGGTTCTGAAGTTCAACCTCACTGAATCTGGGCTCTTCTGTGTCCTGCCATGGTTAACCATGGCTGTTTTTGCAAATATAGGAGGTTGGATTGCTGATACACTTGTGAGCAAAGGCCTCTCCATAACGACTGTTCGAAAGATCATGCAATCAATTGGATTTCTGGGTCCTGCATTTTTTCTTACACAGCTAAGCCATGTCAGAACACCCGCCATGGCAGTACTGTGCATGGCTTGCAGTCAGGGATCTGATGCATTCTCACAATCTGGTCTATATTCCAATCACCAAGACATTGGACCACGCTATGCTGGAGTATTGCTTGGACTATCGAACACCGCAGGAGTGCTTGCTGGTGTCTTTGGTACAGCTGCTACTGGATACATACTCCAACGAGGTTCTTGGAATGATGTATTTAAAGTTGCTGTTGCATTGTACATAATAGGCACATTGGTTTGGAATATCTTTTCAACTGGTGAGAAAGTACTTGACTGA 1719 0.4334 MTMMSGLISNRNFGSFVASGSFYRSGKDPSLQRGGISVSGVYVTQYGGWIAKDPFSRCQHVMLSQCMNLKLKASRRSHSYFSSAPHCSGNIEQREVYRLGLSKRKKPLPEIGKVNKVRACYKSEENGFAETNMDRLPSIEGTGEAILLEGKISPWWQQFPKRWVIVLLCFAAFLLCNMDRVNMSIAILPMSQEFNWNSATVGVIQSSFFWGYLLTQIIGGIWADKLGGKLVLGFGVVWWSIATVLTPIAARLGLPCLLIMRAIMGIGEGVAMPAMNNILSKWIPVAERSRSLALVYSGMYLGSVTGLAVSPALIHKFGWPSVFYSFGSLGSIWFALWLRKAYSSPKEDPDLGEEEKRLILGGSISKESVTVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANIGGWIADTLVSKGLSITTVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWNDVFKVAVALYIIGTLVWNIFSTGEKVLD* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01495 572 PANTHER SOLUTE CARRIER FAMILY 17 155 569 - -
Rops4g01495 572 Pfam Major Facilitator Superfamily 169 530 IPR011701 GO:0022857|GO:0055085
Rops4g01495 572 FunFam ascorbate transporter, chloroplastic isoform X1 370 570 - -
Rops4g01495 572 Gene3D MFS general substrate transporter like domains 370 570 IPR036259 -
Rops4g01495 572 Gene3D MFS general substrate transporter like domains 160 349 IPR036259 -
Rops4g01495 572 SUPERFAMILY MFS general substrate transporter 153 564 IPR036259 -
Rops4g01495 572 ProSiteProfiles Major facilitator superfamily (MFS) profile. 165 569 IPR020846 GO:0022857
Rops4g01495 572 FunFam ascorbate transporter, chloroplastic isoform X2 160 349 - -
Rops4g01495 572 CDD MFS_SLC17A9_like 166 565 IPR044777 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01495 Rops-Chr4 37759116 37765576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01495 4 572 Organic Solute Cotransporters AT4G00370 73.776 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01495 K08193 - gmx:100782221 974.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01495 4 37759116 37765576 Rops4g01495 4 37759116 37765576 ECH
Rops8g01138 8 24029935 24047430 Rops4g01495 4 37759116 37765576 PCT