Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01052 ATGGTTAGTGGGGGAAGTGGAATCACCCCCTTTGTATCTATCATCCGGGAGCTAATGTATTTGAGCACAACATTCAGACACAGAACCCCCAAAGTTATCCTAATTTGTGCATTCAAGAACTCGTCATTTCTCTCAATGCTAGACCTGATCCTCCCAAATTCTGGCACCCCTTGTGACATTTCTAATATACAACTACGAATTGAGGCCTACATCACAAGAAAGAATAATCTTAAATTGGATAGCCCAATTTACCTTCAATCCATAAGGTTCAAGCACAATGCAACAGATGCACCAATATCTCCTATGTTAGGTCCAAACAGTTGGCTTTGGATTTGTGCCGTTATCTCATCCTCGTTCATAATTTTCCTTATCTTAATCGGGGTCATTACCCGTAACTTCATTTTCCCTATAGATCATAATTCTAACAAAATATTTTCATACCCTTTGAGGTCTTTCCTTAACATGTTAGCAATATGTGTGTCCATAGCAATGGCTGCTAGTGCAACTGTTCTTTGGAACAAGAAACACAATGACAAAGAAGCAAAGCAGATTCAGAACTTGAAAGGGTCATCATCATCAGCAGTGTCCCCAACCCCAAAGTTAAAGATTGATGAAACACATAGAGAATTGGAAAGCCTCCCAAGACAATCCCTTGTTGAAGCTACAAACCTGCATTATGGTGTAAGACCTGATCTAAGAAAACTGCTATTTGAACTGAAAGGGTCAAGTGTGGGAGTTCTTGTTTCTGGACCCAAGAAGATGAGGCAGGAGGTTGCATCCATTTGCTCATCCGATTTAGATCAAAATCTTCATTTTGAGTCCTTTAGCTTTAGTTGGTGA 840 0.4 MVSGGSGITPFVSIIRELMYLSTTFRHRTPKVILICAFKNSSFLSMLDLILPNSGTPCDISNIQLRIEAYITRKNNLKLDSPIYLQSIRFKHNATDAPISPMLGPNSWLWICAVISSSFIIFLILIGVITRNFIFPIDHNSNKIFSYPLRSFLNMLAICVSIAMAASATVLWNKKHNDKEAKQIQNLKGSSSSAVSPTPKLKIDETHRELESLPRQSLVEATNLHYGVRPDLRKLLFELKGSSVGVLVSGPKKMRQEVASICSSDLDQNLHFESFSFSW* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01052 279 Gene3D - 1 103 IPR039261 -
Rops8g01052 279 PANTHER NADPH OXIDASE 1 277 - -
Rops8g01052 279 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 1 275 IPR039261 -
Rops8g01052 279 Pfam Ferric reductase NAD binding domain 1 263 IPR013121 GO:0016491
Rops8g01052 279 Gene3D - 155 277 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01052 Rops-Chr8 22428749 22430129 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01052 1 279 Miscellaneous Gene Families AT5G23990 48.252 1.47e-87 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01052 K00521 - gmx:100814642 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g01052 8 22428749 22430129 Rops8g01052 8 22428749 22430129 ECH
Rops8g01052 8 22428749 22430129 Rops4g01521 4 38155197 38160154 PCT