Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01521 ATGGCCGAAGAAACCGTGAGAAGGTCACCTTCTCAAAAAATATATGGCAGGGTTCAATCTGCAATATGGTTACTGGTGGCACTAGTGTTTGTGGGTTGGATTTTAATGTGGATAATGATGCCCACAAATACTTATAGACAAATATGGCAGCCTAAATTCAGAGCAAAGACTAATTCTACCTATCTTGGTTTACAAGGTGCAACCATCCTTATGTTCACTTTTCCAATCTTGTTAATAGCCGCTTTGGGATGTGTCTACCTCCACATAGCCAAAAAAGCAAATGAGTGCAGCAAGGAAACCCAGAAACGTGAGGTAACCATATGGAAGCGTCCGGTGCTTGTAAAAGGCCCTCTTGGCATTGTTTTCAGCACAGAACTAGCACTCTTGCTTATGTTCCTCGCACTAATAGCTTGGTCCTTTGCAACTTTTTTACACAACAGCTTTGCAAATATCACTCAGAAATCAGCAGCTGAAGAGGACGAGAAAGTATGGCAAGACAAACTAGAAAGTTCAGCATTTTGGTTGGGTGTGACTGGAAACATATGCTTGGCTTTCTTGTTTTTTCCCGTGGCACGTGGCTCATCTGTGCTGCCATTGCTTGGCCTCACCTCAGAGAGTTGCATCAAGTACCATATTTGGCTTGGACACATGGTCTTGGCACTCTTCACTTCTCACGGCCTTTGTTTCATCATCTACTGGGCATCTATCCATAAAATTTCTCGGATGTTGGAATGGGCCAAAGTTGGGATATCAAATATGGCTGGAGAGTTATCGTTGTTTTTTGGTTTGATCTTATGGGTTGCCACCATTCCCCGCATTAGGAGAAAAGTCTTTGAGCTCTTCTTCTACACTCATTACCTCTACATCCTCTTCATGGTCTTCTTTATCTTTCATGTTGGCATTTCCTATGCCTGCATGATGCTCCCTGGTTTCTACATCTTCTTGGTTGATCGTTACCTAAGGTTTCTACAGTCAAGGCGCCAAGTTCGTTTGGTTTCTGCTCGTGTTTTGCCATGTGAAGCTGTAGAACTCAACTTCTCTAAGGGCCATGGGTTAACTTATAATCCCACAAGTGTGATGTTCATAAATGTACCAAGCATATCCAAGCTGCAGTGGCATCCATTCACCATTACTTCTAGTAGTAACTTGGAGCCAGAAAAGCTAAGTGTTGTCATTAAAAGTGAAGGAACTTGGTCCCAGAAGCTCTACCAGCTGCTTTCAACTCCTTCCATAATAGATCGCCTAGGTGTATCTGTTGAAGGTCCTTATGGTCCTGCTTCAACCAATTATCTAAGGCATGACACTCTTGTAATGGTGAGTGGAGGAAGTGGCATCACACCTTTTGTTTCCATCATTCGGGAGCTAATATATCTGAGCACTACATTCAAATGCAAAACCCCAAAAGTAGTTCTAATTTGTGCATTCAAGAAATCTTCAAGTCTGTCAATGCTAGATTTGATCCTTCCAATTTCTGGCACCCCATCTGACATTTCTAATCTGGAACTACAAATTGAGACCTACATCACAAGAGACAAGGAGTTTAAGTCAGGTAGCCCAATTCACCCTCAAACCATATGGTTCAAGCCAAATCCAACTGATGCACCCGTACATGCTATATTAGGTCCAAACAGTTGGCTCTGGCTTGGTGCTATAATCTCATCCTCTTTCATCATTTTCCTTATCTTAATTGGGATCATTACCCGTTACTATATTTTCCCTATTGATCATAACTCGAATCAAATATTCTCATATCCTTTGAGGTCATTCCTTAACATGCTAGGAATATGTGTGTCCATAGTCATTGTTGCTAGTGCAGCTGTTCTTTGCAACAAGAAACACAATGCCAAAGAAGCAAAACAGATTCAGAACTTAGAAGGGTCAACCCCGACAGTGTCACCAAACTCAATGATTTACAATGCAGATAGAGAATTGGAAAGCCTTCCAAACCAGTCCCTTGTTCAAGCTACCAATGTTCATTATGGTGTAAGACCTGACCTAAGAAGAATGCTATTTGAATTCAAAGGGTCAAGTGTGGGAGTTTTTGCTTCAGGACCCAGAAAAATGAGGCAGGAGGTTGCAGCCATTTGCTCATCTGGTTTAGCTGAAAATCTGCATTTTGAGTCCATCAGTTTTAGCTGGTGA 2142 0.4192 MAEETVRRSPSQKIYGRVQSAIWLLVALVFVGWILMWIMMPTNTYRQIWQPKFRAKTNSTYLGLQGATILMFTFPILLIAALGCVYLHIAKKANECSKETQKREVTIWKRPVLVKGPLGIVFSTELALLLMFLALIAWSFATFLHNSFANITQKSAAEEDEKVWQDKLESSAFWLGVTGNICLAFLFFPVARGSSVLPLLGLTSESCIKYHIWLGHMVLALFTSHGLCFIIYWASIHKISRMLEWAKVGISNMAGELSLFFGLILWVATIPRIRRKVFELFFYTHYLYILFMVFFIFHVGISYACMMLPGFYIFLVDRYLRFLQSRRQVRLVSARVLPCEAVELNFSKGHGLTYNPTSVMFINVPSISKLQWHPFTITSSSNLEPEKLSVVIKSEGTWSQKLYQLLSTPSIIDRLGVSVEGPYGPASTNYLRHDTLVMVSGGSGITPFVSIIRELIYLSTTFKCKTPKVVLICAFKKSSSLSMLDLILPISGTPSDISNLELQIETYITRDKEFKSGSPIHPQTIWFKPNPTDAPVHAILGPNSWLWLGAIISSSFIIFLILIGIITRYYIFPIDHNSNQIFSYPLRSFLNMLGICVSIVIVASAAVLCNKKHNAKEAKQIQNLEGSTPTVSPNSMIYNADRELESLPNQSLVQATNVHYGVRPDLRRMLFEFKGSSVGVFASGPRKMRQEVAAICSSGLAENLHFESISFSW* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01521 713 Pfam FAD-binding domain 328 427 IPR013112 GO:0016491
Rops4g01521 713 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 324 429 IPR017927 GO:0016491
Rops4g01521 713 CDD NOX_Duox_like_FAD_NADP 331 510 - -
Rops4g01521 713 Pfam Ferric reductase NAD binding domain 433 697 IPR013121 GO:0016491
Rops4g01521 713 PANTHER NADPH OXIDASE 25 711 - -
Rops4g01521 713 SUPERFAMILY Riboflavin synthase domain-like 322 412 IPR017938 -
Rops4g01521 713 Pfam Ferric reductase like transmembrane component 176 295 IPR013130 -
Rops4g01521 713 SFLD Ferric reductase subgroup (FRE) 17 713 - -
Rops4g01521 713 FunFam Ferric reduction oxidase 3 422 539 - -
Rops4g01521 713 Gene3D - 417 537 IPR039261 -
Rops4g01521 713 SFLD Ferric Reductase Domain 40 713 - -
Rops4g01521 713 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 417 490 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01521 Rops-Chr4 38155197 38160154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01521 9 713 Miscellaneous Gene Families AT1G01580 59.860 0.0 854
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01521 K00521 - gmx:100790114 1125.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g01052 8 22428749 22430129 Rops4g01521 4 38155197 38160154 PCT