Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01017 ATGTCGCAGTTGTTGGAGAAAGCCAAAAACTATGTTTCTGAAAAAGTTTCCAACATGCCCAAACCAGAAGCGAGTATCACAGACGTGGATTTCAAGCGCGTGAGCCGTAACTGTGTTGAGTACTTGGCTAAGGTTTCTGTTTCCAACCCCTATTCCACTCCAATTCCCATTTGTGAGATCAAGTACTCCCTCAAAAGTGCTGAAAGGGAGATAGCATCAGGGACCATACCAGACCCAGGGTCATTGAAGGCAAATGACACAACATTGCTGGATGTGCTTGTGAAGGTGCCTCACACCATATTGCTTAGCTTGGGAAAGGACATTGGTGCAGATTGGGACATAGATTATCAATTGGATATTGGTCTAGTTATTGACCTTCCTGTCATTGGCAACTTCACCATCCCTCTTTCTCAAAAGGGAGAGATCAAGCTCCCAACCCTCAGAGACATGTTTGCCTAG 459 0.4532 MSQLLEKAKNYVSEKVSNMPKPEASITDVDFKRVSRNCVEYLAKVSVSNPYSTPIPICEIKYSLKSAEREIASGTIPDPGSLKANDTTLLDVLVKVPHTILLSLGKDIGADWDIDYQLDIGLVIDLPVIGNFTIPLSQKGEIKLPTLRDMFA* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01017 152 SUPERFAMILY LEA14-like 2 150 - -
Rops8g01017 152 PANTHER - 3 146 IPR045043 -
Rops8g01017 152 Gene3D - 17 151 - -
Rops8g01017 152 SMART why 24 141 IPR013990 GO:0009269
Rops8g01017 152 FunFam Desiccation protectant protein Lea14-like 17 151 - -
Rops8g01017 152 Pfam Late embryogenesis abundant protein 44 140 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01017 Rops-Chr8 21377148 21378592 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01017 - - gmx:547837 276.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g01017 8 21377148 21378592 Rops8g01017 8 21377148 21378592 ECH
Rops8g01017 8 21377148 21378592 Rops4g01554 4 38648794 38650198 PCT