Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00810 ATGGCTACCATGAACCCTTTTGATTTGTTGGGTGATGATGTTGAAGACCCTTCTCAGCTCATCGCCGCCGAACAGCTCAAGGCCGCGTCGGTGGCTGCGGCTCCTAAAAAAGCGGCGGCGGCGGCTCAGCAGCGAGCCGGTCAGACTCAGAACAAGCCGGCTCAGTTGCCTACGAAGCCGCCTCCTCCGTCTCAGGCTGTGAGGGAGGCCAGAAATGAAACATCTCGTGGAGGCCGTGGTGGTGGACGAGGAGGTGGTGGAGGTGGTCGTGGATATGGACGTGGTCGTGGTTTTAGTCGTGACTCTTCCAATGATGAGAATTCATTCCCTGTCACTGGAGCACCTGATAATCAGGGTGCCTTTGAAGGAGATGCTGGGAGGTCTTCAGAAAGACGTGGTTATGGTGGACCACGAGGTCCTTACCGTGGTGGTGGTCGTCGTGGAGGTTTTAGCAATGGTGAAGCTGATGAAGAAGGACGACCTCGAAGAGCATTTGAGCGTCGTAGTGGGACTGGGCGAGGAAATGAATTCAAACGTGAAGGTTCTGGACGAGGTAACTGGGGAACCCAAACTGATGAAATTGCTGAGGTGACTGATGAAGGCGTGAATGAAACTGAAAAATTGGGTGATGAGAAGCCTGCAGTCGAAAAAGATGTTGCTGATGGAAACAAGGAGAGTCCTGCTAATGAAACTGAAGAAAAAGAGCCTGAAGATAAGGAGATGACTCTGGAGGAATATGAGAAACTGCTGGAAGAGAAAAGGAAGGCCCTGCAAGCACTCAAGACTGAAGCAAGAAAGGTAGACATCAAAGAGTTTGAATCCATGCAGCCCTTATCAAGCAAGAAAAACAATCATGACATCTTTGTTAAATTGGGATCTGATAAGGACAAGCGCAAAGAAGCAGAGAAGGAAGAGAAGTCCAAGAAGTCTGTCAGCATCAACGAGTTTCTGAAGCCTGCTGAAGGGGAAACCTACTACTCAGGTGGTCGTGGCAGGGGACGTGGCCGTGGTTCTCGAGGAGGTTACCGTGGAAATGCTGCTGGCAATGCACCAGCTCCATCCATTGAAGATCCTGGGCATTTCCCAACCTTGGGTGGCAAGTGA 1104 0.5109 MATMNPFDLLGDDVEDPSQLIAAEQLKAASVAAAPKKAAAAAQQRAGQTQNKPAQLPTKPPPPSQAVREARNETSRGGRGGGRGGGGGGRGYGRGRGFSRDSSNDENSFPVTGAPDNQGAFEGDAGRSSERRGYGGPRGPYRGGGRRGGFSNGEADEEGRPRRAFERRSGTGRGNEFKREGSGRGNWGTQTDEIAEVTDEGVNETEKLGDEKPAVEKDVADGNKESPANETEEKEPEDKEMTLEEYEKLLEEKRKALQALKTEARKVDIKEFESMQPLSSKKNNHDIFVKLGSDKDKRKEAEKEEKSKKSVSINEFLKPAEGETYYSGGRGRGRGRGSRGGYRGNAAGNAPAPSIEDPGHFPTLGGK* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00810 367 SMART HABP4_PAI_RBP1_2 161 268 IPR006861 -
Rops8g00810 367 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 366 IPR039764 GO:0003723
Rops8g00810 367 MobiDBLite consensus disorder prediction 200 241 - -
Rops8g00810 367 Pfam Stm1 1 81 IPR019084 -
Rops8g00810 367 Pfam Hyaluronan / mRNA binding family 161 267 IPR006861 -
Rops8g00810 367 Gene3D - 159 271 - -
Rops8g00810 367 MobiDBLite consensus disorder prediction 265 367 - -
Rops8g00810 367 MobiDBLite consensus disorder prediction 151 180 - -
Rops8g00810 367 MobiDBLite consensus disorder prediction 30 241 - -
Rops8g00810 367 MobiDBLite consensus disorder prediction 287 312 - -
Rops8g00810 367 Coils Coil 239 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00810 Rops-Chr8 16899207 16903957 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00810 K13199 - gmx:100814825 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00810 8 16899207 16903957 Rops8g00810 8 16899207 16903957 ECH
Rops4g00567 4 15485895 15490644 Rops8g00810 8 16899207 16903957 PCT