Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00567 ATGGCGACAATGAACCCTTTTGATTTGTTAGGTGATGACGCTGAGGACCCATCGCAGTTGATCGCCGCCGAACAACTTAAGGCGGCGATGGCAGCGGCTACGACGGCGCCGACAAAGAAAGTGGGTGGTCGTGGTGCCGGTCAGGCTCAGCCGAATAAGCCGGCTCAGTTGCCCTCGAAGCCGCTTCCTCCTTCTCAGGCTGTGAGGGAGGCAAAAAATGAACCTTACCGTGGTGGTCGTGGAGGTGGCCGAGGAGGTGGACGTGGTGGGTTTGGACGTGGTCGTGGTGGAAGTGGTTTTGGCCGTGATTTCTCCAATGATGAAAACTCATTCCCTTCCTCTGGAGCCCCTGCTAATCAAGGTGCTTTTGAAGAAGGAGATGCTGGGAATCCCTCAGAAAGACGTGGTTATGGTGGACCTCGTGGGCCTCATCGTGGTGATCGTCGTGGAGGTTTTAGCAATGGTGAAGCTGGTGAAGAAGGACGTCCTCGGAGAGCATTTGAACGCCGCAGTGGGACTGGACGAGGAAGTGAAATCAAACGTGAAGGTTCTGGACGAGGGAACTGGGGAACACAGACTGATGAAATTGCTCAGGTGACTGATGAAGTGGTGAATGAAACTGAAAAGAATTTGGGTGATGAGAAGCCTGCTGGTGAGGATGATGCGGCAGATGGAAACAAGGAGACTCCAGCTAATGAAACTGAAGAAAAGGAGCCTGAGGATAAGGAGATGACACTGGAAGAATATGAGAAAGTGCTGGAAGAGAAAAGGAAAGCCTTGCAGGCGCTCAAGACTGAAGGGAGAAAGGTGGATATTAAGGAGTTTGAATCCATGCAGCCACTGTCAAACAAGAAAGACAATGATGACATCTTTGTTAAATTGGGATCTGACAAGGATAAGCGCAAGGATGCTTTTGAGAAGGAGAAATCAAAGAAGTCTGTCAGCATCAATGAGTTTCTGAAGCCCGCTGAAGGAGAAAGATACTACAACCCAGGTGGGCGTGGCCGGGGTCGTGGCCGTGGTTCTCGAGGAGGTTATGGTGGTGGAAATTATGCAGGCAGCAATGTAGCAGCTCCATCTATCGAGGATCCTGGTCATTTCCCAACTTTGGGTGGCAAGTGA 1122 0.5116 MATMNPFDLLGDDAEDPSQLIAAEQLKAAMAAATTAPTKKVGGRGAGQAQPNKPAQLPSKPLPPSQAVREAKNEPYRGGRGGGRGGGRGGFGRGRGGSGFGRDFSNDENSFPSSGAPANQGAFEEGDAGNPSERRGYGGPRGPHRGDRRGGFSNGEAGEEGRPRRAFERRSGTGRGSEIKREGSGRGNWGTQTDEIAQVTDEVVNETEKNLGDEKPAGEDDAADGNKETPANETEEKEPEDKEMTLEEYEKVLEEKRKALQALKTEGRKVDIKEFESMQPLSNKKDNDDIFVKLGSDKDKRKDAFEKEKSKKSVSINEFLKPAEGERYYNPGGRGRGRGRGSRGGYGGGNYAGSNVAAPSIEDPGHFPTLGGK* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00567 373 SMART HABP4_PAI_RBP1_2 163 271 IPR006861 -
Rops4g00567 373 MobiDBLite consensus disorder prediction 186 205 - -
Rops4g00567 373 Pfam Stm1 1 82 IPR019084 -
Rops4g00567 373 Coils Coil 246 266 - -
Rops4g00567 373 Pfam Hyaluronan / mRNA binding family 163 270 IPR006861 -
Rops4g00567 373 MobiDBLite consensus disorder prediction 206 245 - -
Rops4g00567 373 MobiDBLite consensus disorder prediction 300 373 - -
Rops4g00567 373 MobiDBLite consensus disorder prediction 138 182 - -
Rops4g00567 373 Gene3D - 161 274 - -
Rops4g00567 373 MobiDBLite consensus disorder prediction 103 117 - -
Rops4g00567 373 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 372 IPR039764 GO:0003723
Rops4g00567 373 MobiDBLite consensus disorder prediction 29 245 - -
Rops4g00567 373 MobiDBLite consensus disorder prediction 300 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00567 Rops-Chr4 15485895 15490644 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00567 K13199 - gmx:100814825 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g00567 4 15485895 15490644 Rops4g00567 4 15485895 15490644 ECH
Rops4g00567 4 15485895 15490644 Rops8g00810 8 16899207 16903957 PCT