Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00804 ATGACCCAACCACCGAAACTAGCCCAAAACTTACAAATATCCGATGATACTAGACAAGTCGCATTACAATTAGAAAAAACAATAAATTTAGAAGACCATAACAATTTTCCCTCCATACACTCACCATCATCAGCAGCATCATCTTCTTATTCTTCTTTGGGTCTAAGATCCGAGAAACTTAGAAAAAGGTGGAAGGAGTACCAAGGCATGAGCAATTGGGACGGCTTGCTTGACCCATTGGACGATAACCTACGTGCTGAAATCCTACGTTACGGTCATTTCGTGGAAGCTGCTTATAAATCGTTTGAATTTGACCCTTCTTCCACTAACTATGCAAACTGCAGGTTCCCAAAAAGCACACTTTTTGAACGGTGTGGTTTACCTAACACGGGTTATAAGGTGACCAAACACCTACGTGCAACTTCAGGGATTCAACTACCCAGTTGGGTAGACAAAGCACCAAGCTGGGTTGGAACACAATCAAGCTACGTTGGATATGTAGCAGTGTGTGACAACAAAGAAGAGATCAAAAGACTTGGTCGGCGTGATGTTGTTGTTGCATATAGAGGAACCACCACATGTTTAGAATGGCTTGAGAATTTTCGTGCCACTCTCACCAACCTCCCTATAATCCCATGCAATAACAACAACAACAACAAAAAATTAGCCTTTGAAGATCAAAACGGTGGGGCCATGGTGGAAAGTGGATTCTTGAGTCTCTACACATCATCACAGCCCAATAACCCTTCATTGCAAGAAATGGTGAAGCAAGAAATTTCTCGTATTCTCCAAACCTACGGTGGTGAACCTTTGAGTCTCACCGTCACCGGCCATAGCCTGGGGGCGGCATTGGCAACACTCACGGCGTATGACGTTAAAACCGCCTTTTCCCTGTTGCCGGTTACTGTCATCTCATTCGGTGGGCCCCGCGTGGGTAACCGGAGCTTCCGGTTACGACTTGAGAAGCAAGCGACGAAGGTGTTACGAATAGTGAACTCCGATGATGTTATAACCAAGGTTCCAGGGTTTGTGTTTGATGATGACGTGGCAACACGTGGAGGGATCCACGTGGCGGGTGTTCCGAGTTGGATTCAGAAGAGAGTTGAGGAGGCACAGTGGGGGTACGCTGAGGTTGGGAAGGAACTTCGATTGTGTAGCAGGGATTCTCCGTACCTCGGAAGCACGAATGTTGCCACGTGTCACGAGCTCGACACATATTTGCACCTGGTCGATGGATTTGTGAGTTCCAAGTGTCCCTTTAGAGCCTCTGCTAAGAGGTTCCTCAGGCGATGA 1293 0.4664 MTQPPKLAQNLQISDDTRQVALQLEKTINLEDHNNFPSIHSPSSAASSSYSSLGLRSEKLRKRWKEYQGMSNWDGLLDPLDDNLRAEILRYGHFVEAAYKSFEFDPSSTNYANCRFPKSTLFERCGLPNTGYKVTKHLRATSGIQLPSWVDKAPSWVGTQSSYVGYVAVCDNKEEIKRLGRRDVVVAYRGTTTCLEWLENFRATLTNLPIIPCNNNNNNKKLAFEDQNGGAMVESGFLSLYTSSQPNNPSLQEMVKQEISRILQTYGGEPLSLTVTGHSLGAALATLTAYDVKTAFSLLPVTVISFGGPRVGNRSFRLRLEKQATKVLRIVNSDDVITKVPGFVFDDDVATRGGIHVAGVPSWIQKRVEEAQWGYAEVGKELRLCSRDSPYLGSTNVATCHELDTYLHLVDGFVSSKCPFRASAKRFLRR* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00804 430 Pfam Lipase (class 3) 185 343 IPR002921 GO:0006629
Rops8g00804 430 Gene3D alpha/beta hydrolase 63 429 IPR029058 -
Rops8g00804 430 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 29 426 - -
Rops8g00804 430 CDD Lipase_3 159 411 - -
Rops8g00804 430 SUPERFAMILY alpha/beta-Hydrolases 86 380 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00804 Rops-Chr8 16715936 16717228 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00804 30 430 Acyl Lipid Metabolism Gene Families AT2G44810 65.423 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00804 K16818 - gmx:100800549 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00804 8 16715936 16717228 Rops8g00804 8 16715936 16717228 ECH
Rops4g00576 4 15603844 15605097 Rops8g00804 8 16715936 16717228 PCT