Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00789 ATGGGTTGCACGGCGTCGAAGTTGGAAAATGAGGACACGGTGCGGCGGTGCAAGGACCGTCGCCGCCTTATGAAAGAAGCTGTTTACGCTCGTCACCACCTCGCGGCTGCGCAATCTGACTACTGCCGTTCCCTCCGCCTCACCGGTACCGCGCTCTCCAACTTCGCCGCCGGTGAACCCCTCTCTGTCTCCGATAACACCCCCGCCGTTTTCCTCAACTCCACAACAACAACCGCCGCTAAACCACCACCACAACCGCCGTCACGTATTCCTTCACCGTCACCGTCCGTTCACCCTCCTCCACCGCCACGTTATGACCCTTCGCCTTCACCCACCATAACAAGCTCAAAACTTCCCCATATTCTCTCCGCCTCCTCCACCTCAGGCAACAACCGTCGCCGGAAACCGCCACCACCGAAGCTCCCTCATATTCTCTCCGATTCAAGCCCTTCTTCAACCCCACGAAGCCAAGCTTCCAATTTTCCTTCGAATTTCTTCCCCACTGCACATTCTACCTATTCTTCAACCCCTTCTCAAACCTCTTCCGTTTGGAACTGGGAAAATTTCTACCCTCCACCACCACCAGGTTCCGATTACTTCGAACGAGAACGAGAACCAGAACCAGAACAAGAACACCCTGATTCAGCTTCACTATTCTCTTATAAATCAAGAAAAAGTGAGAAACACCTCGATTCAGCTTCACAATTCTCTTATAAATCAAGAAACAGTGAGAAACACCCTGATTCAGCTTCACAATTCTCTTACAAATCAAGAAACAGCGAAGTCTCTGACTCCCGACAACAACATCGTACCCCTTCACATGATGTCGGGGGATTCGAATCCGAGAGATCAGAATATGATTACTTCAATGGAAAAATCACAACTTTTCAGGGTCAAGAGCATCGTGGTGGTCCTCATCATCTTCGAGAGGAGCATACTGAGACTGAGAGAGAGGAAGTTGAGTGTAGTGAATGGGGTGATCATTACAGCACCACGACATCGTCCGAGGATGATGATGAAGAAGATGAAGATGATGGGGTTGAAGGGGATGTTGAATCAAGGTCCGAGATTGGGACCCGGTCAAATTTCGGGTCATCGGTACCAGTGGGGAAATCAGAGGAAGTGAAATCGGATGATGAGGAGGAAAGGGGGATGGAGATGGAGGTGAAGATGAAGATGGTGGTTAGGCATAAGGATTTGAAGGAGATTGTTGAAGCTATTAAGGAGAATTTTGATAGAGCTGCTTTGGCTGGGGATCAAGTTTCTGAGATGCTTGAGATTAGTAGGGCTCAACTTGATCGAAGTTTCAGACAATTGAGGAAAACTGTGTATCATTCAAGTAGCATATTGAGCAACCTTAGCTCGAGTTGGACCTCCAAACCGCCATTGGCGGTTAAGTACCAGCTTGACACCGGTTCGCTGAATGAACCGGGCGGTCCAAAGAGTCTTTGCTCCACTTTGGAGAGGCTTTTGGCTTGGGAGAAGAAGCTCTATGAGGAGGTTAAGGCTAGAGAAGGTATGAAGATTGCACATGAAAAGAAATTGTCGGCTTTGCAGAATCAGGAATACAAAGGAGAGGATGAAGCAAAGATATTCAAAACCAAGACTTCCATAAATAAGCTGCAATCACTCATAATTGTGACATCTCAGGCTGTGTCTACCACCTCAACTGCCATCATTGGCCTTAGGGACTCTGATCTTGTTCCTCAGCTTGTTGAGCTCTGTCATGGAATGATGTACATGTGGAGATCAATGCATCAGTACCATGAAATCCAAAGCCACATAGTGCAACAAGTCCGCGGCCTAGTGAACAGATCATCAAGAGGTGACTCAACTTCTGAACTGCACAGGCAGGCAACTCGGGACCTCGAATCAGCTGTGTCATCTTGGCACACCAGTTTCTGTCGCCTCATAAAATTTCAGCGCGACTTTATCCTCTCCTTACATGGCTGGTTCAAGCTTAGCCTTACACCAGTCAACAATGATAACATCAACACCAACACCAGGGAACACTCAGATGCATACATGTTTTTCGATGAATGGAAGCTCGCACTTGACCGTGTTCCAGACACTGTTGCATCTGAAGCCATCAAGAGCTTCATCAATGTTGTCCATGTGATATCCTCAAAGCAAGCAGAAGAACTCAAGATTAAGAAAAGAACCGAGACCGCTTCCAAGGAACTTGAGAAAAAGGCTTCATCATTGAGAAACATAGAAAGAAAATTTTACAACTCATATTCTTTGGTTGGTATTAGCCTCCCTGACACTGCACCTGATCATGGACAAGGTTTGGATGCACGCGACCCTCTTGCTGAGAAAAAATTGGAACTTGCAACTTGCCAAAGGCGTGTTGAAGATGAAATGTCAAGGCATTCAAAAGCTGTTGAGGTAACAAGAGCTATGACACTCAATAATCTACAAACAGGTTTGCCTGGAGTTTTTCAAGCATTGACCAGTTTTTCTTCATTGTTCACTGAGGCTCTTGAAACAGTGTGTACTCGTTCATATACCATAAAGTAG 2520 0.4683 MGCTASKLENEDTVRRCKDRRRLMKEAVYARHHLAAAQSDYCRSLRLTGTALSNFAAGEPLSVSDNTPAVFLNSTTTTAAKPPPQPPSRIPSPSPSVHPPPPPRYDPSPSPTITSSKLPHILSASSTSGNNRRRKPPPPKLPHILSDSSPSSTPRSQASNFPSNFFPTAHSTYSSTPSQTSSVWNWENFYPPPPPGSDYFEREREPEPEQEHPDSASLFSYKSRKSEKHLDSASQFSYKSRNSEKHPDSASQFSYKSRNSEVSDSRQQHRTPSHDVGGFESERSEYDYFNGKITTFQGQEHRGGPHHLREEHTETEREEVECSEWGDHYSTTTSSEDDDEEDEDDGVEGDVESRSEIGTRSNFGSSVPVGKSEEVKSDDEEERGMEMEVKMKMVVRHKDLKEIVEAIKENFDRAALAGDQVSEMLEISRAQLDRSFRQLRKTVYHSSSILSNLSSSWTSKPPLAVKYQLDTGSLNEPGGPKSLCSTLERLLAWEKKLYEEVKAREGMKIAHEKKLSALQNQEYKGEDEAKIFKTKTSINKLQSLIIVTSQAVSTTSTAIIGLRDSDLVPQLVELCHGMMYMWRSMHQYHEIQSHIVQQVRGLVNRSSRGDSTSELHRQATRDLESAVSSWHTSFCRLIKFQRDFILSLHGWFKLSLTPVNNDNINTNTREHSDAYMFFDEWKLALDRVPDTVASEAIKSFINVVHVISSKQAEELKIKKRTETASKELEKKASSLRNIERKFYNSYSLVGISLPDTAPDHGQGLDARDPLAEKKLELATCQRRVEDEMSRHSKAVEVTRAMTLNNLQTGLPGVFQALTSFSSLFTEALETVCTRSYTIK* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00789 839 MobiDBLite consensus disorder prediction 198 212 - -
Rops8g00789 839 MobiDBLite consensus disorder prediction 302 325 - -
Rops8g00789 839 MobiDBLite consensus disorder prediction 75 385 - -
Rops8g00789 839 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Rops8g00789 839 MobiDBLite consensus disorder prediction 80 109 - -
Rops8g00789 839 PANTHER UNCHARACTERIZED 199 833 - -
Rops8g00789 839 MobiDBLite consensus disorder prediction 110 133 - -
Rops8g00789 839 MobiDBLite consensus disorder prediction 262 287 - -
Rops8g00789 839 Coils Coil 718 738 - -
Rops8g00789 839 MobiDBLite consensus disorder prediction 247 261 - -
Rops8g00789 839 MobiDBLite consensus disorder prediction 145 187 - -
Rops8g00789 839 Pfam Protein of unknown function (DUF632) 400 705 IPR006867 -
Rops8g00789 839 MobiDBLite consensus disorder prediction 334 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00789 Rops-Chr8 16294047 16300878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00789 485 652 Acyl Lipid Metabolism Gene Families AT2G27090 34.911 3.67e-24 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00789 - - gmx:100815888 1098.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00789 8 16294047 16300878 Rops8g00789 8 16294047 16300878 ECH
Rops4g00585 4 15787260 15795343 Rops8g00789 8 16294047 16300878 PCT