Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00585 ATGGGTTGCACGGTGTCGAAGCTTGACAACGAGGAAACGGTGCGGCGGTGCAAGGAACGACGTCGTTTTATGAGAGACGCTGTTTACTCTCGCCACCACCTCGCGACAGCGCACTCCGACTACTGCCGTTTCCTCCGCCTCACCGGCTCCGCTCTATGCACGTTCGCCGCCGGAGAACCTCTCGCCGTCTCCGGAGACTTCCCCGCAGTTGTAATCAACACCACCACCAAGAATAATCATGCGCCGCCGCAACATCCTCGTCCTCCTCCTTCCGCCACCGTAACAAACTCCAAACCTCCTCCTCCTCCTTCCGCTGCCGTAACAAACTCCAAACCTCCTCCTTCTTCCGCCGCCGTAACAAACTCCAAACTACCTCACGTAATGTCTTCTTCCTTAGACGCCGGCAACCGTCGCCGGAAACCGAAGCCGAAGCTCCCTCACATTCTCTCTGAATCCAGCCTTTGTTCCTCACCGAGAAGTGAATCATCGAACTTGTTTTTTGGGCAACAAGCGTATTCTACAGTTTCCGAAACCTCTTCCGTTTGGAATTGGGAAAATTTCAACCCTCCGCCGTCTCCTCCAGGCTCCGATTACTTCCGGCAATGTTCTCAGCCACCGGAAAAACCATATTCAGAAACTCCAGAATCCGATTCTGAATCGGAATTAGCGTTTAACTTGTTCCATTCGAAACCTCAGAATCTCAAAATCGAAAATGCGAACGTTGATTTTAAACAAGAGCAAGAACGACACCGTTTCGATGCCGAGGGTTCTGATAGCGAGAGATCCGAACTTGAATCCAAACCTGAACCTGTTCGGTTCGAGACGGAGCAAGAGGAAGTTCGGTTTAGTGAGTGGGGAGACCGATACAGTCCCACGAGCTCATCGGAGCGTGACGGAGGAGGCATCGCCGGCGGCGATGCTCCGGCGGTGGAGGAAGAGAATGTTGGCGAGGATGTTATGGAGAAGAAAATGGTGATGAGGCATAAGGATTTGAAAGAGATTGTTGAAGCGATTAGAGAGAATTTTGAGAAGGCTGCGGTTGCCGGAGATCAGTTATCGGAGATTCTCGAGATTGGTAGAGATCAACTTGATCGGAGTTTCAAGCGATTGAGGAAAACTGTGTACCATTCAAGTGGTTTATTGAGCAACCTGAGCTCGAGTTGGACCTCTAAACCGCCATTAGCGGTTAAGTACCGGTTCGACGCCGGTTCAATTGATGGACCGGGCGGTCCGAAGAGCCTGTGCTCCACTTTGGACCGGCTTTTGGCTTGGGAGAAAAAGCTCTATCAGGAAGTGAAGGCTAGAGAAGGTGTGAAGATTGAGCATGAAAAGAAATTGTCAGCTCTGCAGAGTCAGGAATGCAAAGGGGGTGATGAAGCAAAGATAGACAAAACCAAGGCTTCCATAACAAGGTTACAGTCACTAATTGTTGTCACATCTCAAGCTGTTTCTACCACCTCAGCTGCCATTAATGGCCTTAGGGACTCTGATCTTGTTCCTCAGCTTGTTGAGCTCTGTCATGGAATCATGCACATGTGGAGATCAATGCACCAGTACCATGAAATTCAAAGCAACATTGTACAACAAGTCCGTGGCCTTGTGAACCGATCATCTAAAGGTCACTCAACGTCTGAATTGCACAAGCAGGCAACTCGAGATCTTGAATCAGCTGTGTCAGCTTGGCACTCCAGTTTTTGCCGCCTTATAAAATTTCAAAGGGACTTTATCCTTTCTCTTCATGGCTGGTTTAAGCTGAACCTTATCCCACTCAACAATGACAACATCAACAACAACATCATAGAACCATCTGATGCATTTTCCTTTTGTGATGAATGGAAAATCGCCCTTGACCATGTCTCTGATACAGTTGCTTCTGAAGCCATCAAAAGCTTCATCAATGTTGTGCATGAAATATCTGTCAAGCAATCTGAAGAGTTCAAGATTAAGAAGAGAACTGAGACTGCTTCCAAGGAACTTGAGAAAAAATCTTCATCACTGAGGAATATAGAAAAGAAGTTTTACAACTCATATTCTATGGTAGGTATCAATCTTCCTGACTCTGACCCTCAAGGCTTGGATGCAAGAGATCCACTTGCTGAGAAAAAGTTGGAACTAGCAGCAAGCCAAAGGCGTGTTGATGATGAAATGGTGAATCACTCAAAGGCTATAGAGGTGACTAGAGCTAAGACACTCAACAATCTACAAACAGGTTTGCCTGGATTGTTTCAAGCATTGACAAGTTTTTCTTCCCTATTCACTGTGTCTCTTGAGTCGGTGTGTACTCGTTCATATACCGTCAAGTAG 2304 0.474 MGCTVSKLDNEETVRRCKERRRFMRDAVYSRHHLATAHSDYCRFLRLTGSALCTFAAGEPLAVSGDFPAVVINTTTKNNHAPPQHPRPPPSATVTNSKPPPPPSAAVTNSKPPPSSAAVTNSKLPHVMSSSLDAGNRRRKPKPKLPHILSESSLCSSPRSESSNLFFGQQAYSTVSETSSVWNWENFNPPPSPPGSDYFRQCSQPPEKPYSETPESDSESELAFNLFHSKPQNLKIENANVDFKQEQERHRFDAEGSDSERSELESKPEPVRFETEQEEVRFSEWGDRYSPTSSSERDGGGIAGGDAPAVEEENVGEDVMEKKMVMRHKDLKEIVEAIRENFEKAAVAGDQLSEILEIGRDQLDRSFKRLRKTVYHSSGLLSNLSSSWTSKPPLAVKYRFDAGSIDGPGGPKSLCSTLDRLLAWEKKLYQEVKAREGVKIEHEKKLSALQSQECKGGDEAKIDKTKASITRLQSLIVVTSQAVSTTSAAINGLRDSDLVPQLVELCHGIMHMWRSMHQYHEIQSNIVQQVRGLVNRSSKGHSTSELHKQATRDLESAVSAWHSSFCRLIKFQRDFILSLHGWFKLNLIPLNNDNINNNIIEPSDAFSFCDEWKIALDHVSDTVASEAIKSFINVVHEISVKQSEEFKIKKRTETASKELEKKSSSLRNIEKKFYNSYSMVGINLPDSDPQGLDARDPLAEKKLELAASQRRVDDEMVNHSKAIEVTRAKTLNNLQTGLPGLFQALTSFSSLFTVSLESVCTRSYTVK* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00585 767 MobiDBLite consensus disorder prediction 206 221 - -
Rops4g00585 767 MobiDBLite consensus disorder prediction 186 221 - -
Rops4g00585 767 Pfam Protein of unknown function (DUF632) 331 637 IPR006867 -
Rops4g00585 767 MobiDBLite consensus disorder prediction 247 285 - -
Rops4g00585 767 PANTHER UNCHARACTERIZED 1 761 - -
Rops4g00585 767 MobiDBLite consensus disorder prediction 82 109 - -
Rops4g00585 767 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Rops4g00585 767 MobiDBLite consensus disorder prediction 75 162 - -
Rops4g00585 767 MobiDBLite consensus disorder prediction 247 314 - -
Rops4g00585 767 MobiDBLite consensus disorder prediction 110 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00585 Rops-Chr4 15787260 15795343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00585 413 583 Acyl Lipid Metabolism Gene Families AT2G27090 38.953 6.61e-28 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00585 - - gmx:100792843 1003.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g00585 4 15787260 15795343 Rops4g00585 4 15787260 15795343 ECH
Rops4g00585 4 15787260 15795343 Rops8g00789 8 16294047 16300878 PCT