Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01156 ATGATTGAAGGTGAATTTGAAGAATCATTGATATTTGTGTTGTGGGTAGGTGCTATTTTGGTGTCTTTGGTGATGGGGATGAGGAATGATGGACAGAAACAACAGCTTCTTCATCAAGGTGTTGTTGTTGGTGGTGGTGGTGGCAGAACCAATGGTTTCATTCCTAGCTCCTTTCGTGCTATCTCAAGCTACCTGAGGATTGTTTCAAACGGTGCTTCCACTGTTGCACGTTCTGCTGCATCGGTTGCTTCATCGATTGTGGATAGGGATGACGATGCTGACCATGATCAGGTTATCTGGGCTGGGTTTGATAAGTTAGAGGGTGAGGGTGGAGTCATTCAGCAAGTACTCCTGCTAGGCTATCGGTCTGGCTTCCAGGTTTGGCATGTTGATGAATCAAATAATGTGCGAGACCTAGTTTCCAGACGTGATGGTCCTGTCTCTTTTATGCAAATGGTACCAAATCCAATTGCATCAAAGAGATCAGAAGACAAGTTCGCAAACAGTCGCCCTCTGCTGGTAGTTTGTGCTGATGGGTTCTTTGCAGGAGGCAGCAATGTTAAGGATGGGTTGACTGCCCCTGGCAATGGGAGCCCTTCAAACTCCCATGACCAAATGAATGGAAACTATCTTCCAACTAGTGTTCAGTTTTATTCTATGAAATCTCACTCATATGTTCATGTAATGAAGTTTAGATCAGTTGTTTATTCTGTAAGGTGCAGTTCTCGAATAGTTGCTGTTTCTCAATCCACTCAGATACACTGTTTTGATTCTACCACATTGGAAAGGGAATATACTTTACTTACCAATCCTATAGTCATGAGTTGTCCGGGTTCTGGAGGCATAGGCTATGGACCACTTGCAGTGGGTCCAAGATGGCTGGCTTATAGTGGAAGCCCAGTTGCAGTCTCCAATTCTGGGCATGTCTGCCCGCAACATTTGACACCTTTTGCAAGCTTTCCTGGTTTTTCTTCAAATGGGAGCTTGATTGCACACTATGCCAAAGAGTCAAGCAAGCATCTTGCTTCTGGGATTGTGACCCTTGGAGATATGGGATATAAGAAACTTTCCAGATACTGCTCTGATAGCAATGGTTCATTACAATCTGTAAATTCTGGCTCGAAGAGCAACGGAACCATTAATGGCCATTCAATAGATGCAGATAACATTGGAATGGTCATTGTTAAAGATATTGTCGCCAAAAACGTTGTTGCCCAATTCCGGGCCCACAAGAGTCCCATTTCAGCCTTATGCTTTGATCCTAGTGGCACCATATTAGTGACTGCTTCTGTTCAGGGTCATAACATAAATGTTTTTAAGATAATGCCTGGATGTGAGAATTTGTCAGCATCTGATGCTGGTCCATCTAATGTTCATTTGTACAGGCTGCAACGTGGCTTTACGAATGCAGTTATACAAGATATCAGTTTCAGTGATGACAGCAAGTGGATTATGATTAGTTCCTCAAGGGGCACCAGCCATCTATTTGCCATAAATCCTCAAGGAGGATATGTAAATATTCAGTCTGATGATAGTTTTACAGCAAAAAATAATGGATTGGGTGCTACTACTAATCAAGCAGTTTGCTGGTCTCATAGTTCAGCCATACAAATGTCTAAACAGCAGAGCCTGGTGGTTGCTGGCCCTCCAATCACACTTTCTGTAGTAAGCAGAATTAGGAATGGAACTAATGGCTGGAGAGGCACTGTAAGTGGTGCGGCTGCAGCTGCAACTGGTAAGAAGGGTTCCCTTTCGGGGGCTATTGCTTCATCTTTCCGTAACTGTAAAGGAAGTGGTGCCTCATATGTTGAAGGGAACTATTCCAAGGCAAAGTATCACTTGTTGGTTTTTTCACCCAGCGGATCCATGATTCAATATGCTCTGCGAACATTAACTGGTCAAGATTCAGCTGTTGTTTCTGGATTAACCCCTGCTCATGAATCCATTCCACAGGCTGATGCAAAATTAGTAGTCGAGGCCATGCATAAATGGAACATATGTCAGAGTCATAGTCGGAGAGAGCGAGAAGATAATGTTGACATATATGGTGAGAATGGAATTTCAGACAGCAATAAAATATATCCAGAGGAAGTGAAGGAGGAGAACATCATTAACCCTAAATTAAAAATTGGAGTCATGAAAGTGAATCCCTGTGTTGAGGAACAGCATCATTTGTATATTTCAGAAGCTGAACTGCAAATGCATCAAGCTCAGGTTCCATTGTGGGCAAAGCCAGAGATATATTTTCATTCCATGTTGAAAGAGTCTACCATAATGGATGAAGAAGCTGCTTCAGGGGGAGAGTTTGAGATTGAAAGGATCCCAACTTGCATGATTGAAGCTAGATCAAAAAACTTGGTTCCAATTTTTGACTATATTCAGACCTCAAAATTACAACAAACAAGGACTCCTGCTCTGGATGGCAAGATAAATGACCAACTGTTGCATCACAGTTCCCAGCTATCTGGAAATGGCAGGATTTCACCCAGGGCTATTTTGGGATCTCCTGAGTGTGTGACTAATTCTGATAGTGCTGTTACTGAATTTAAAAGTGGGATTGAAGGAACTGAGTGGGATGATCATGTGATGCCATCTGAAACTATGGATTTTGTAAATAACAATGACACCCTTAAACCAAATACTCAGCATGAGATTATGAATTTGATTGAAGGCATGGAAATATTCTTTCATTTCGCACTGGAGGCTTAA 2709 0.4234 MIEGEFEESLIFVLWVGAILVSLVMGMRNDGQKQQLLHQGVVVGGGGGRTNGFIPSSFRAISSYLRIVSNGASTVARSAASVASSIVDRDDDADHDQVIWAGFDKLEGEGGVIQQVLLLGYRSGFQVWHVDESNNVRDLVSRRDGPVSFMQMVPNPIASKRSEDKFANSRPLLVVCADGFFAGGSNVKDGLTAPGNGSPSNSHDQMNGNYLPTSVQFYSMKSHSYVHVMKFRSVVYSVRCSSRIVAVSQSTQIHCFDSTTLEREYTLLTNPIVMSCPGSGGIGYGPLAVGPRWLAYSGSPVAVSNSGHVCPQHLTPFASFPGFSSNGSLIAHYAKESSKHLASGIVTLGDMGYKKLSRYCSDSNGSLQSVNSGSKSNGTINGHSIDADNIGMVIVKDIVAKNVVAQFRAHKSPISALCFDPSGTILVTASVQGHNINVFKIMPGCENLSASDAGPSNVHLYRLQRGFTNAVIQDISFSDDSKWIMISSSRGTSHLFAINPQGGYVNIQSDDSFTAKNNGLGATTNQAVCWSHSSAIQMSKQQSLVVAGPPITLSVVSRIRNGTNGWRGTVSGAAAAATGKKGSLSGAIASSFRNCKGSGASYVEGNYSKAKYHLLVFSPSGSMIQYALRTLTGQDSAVVSGLTPAHESIPQADAKLVVEAMHKWNICQSHSRREREDNVDIYGENGISDSNKIYPEEVKEENIINPKLKIGVMKVNPCVEEQHHLYISEAELQMHQAQVPLWAKPEIYFHSMLKESTIMDEEAASGGEFEIERIPTCMIEARSKNLVPIFDYIQTSKLQQTRTPALDGKINDQLLHHSSQLSGNGRISPRAILGSPECVTNSDSAVTEFKSGIEGTEWDDHVMPSETMDFVNNNDTLKPNTQHEIMNLIEGMEIFFHFALEA* 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01156 902 Gene3D - 114 548 IPR015943 GO:0005515
Rops7g01156 902 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 35 873 IPR045142 GO:0006914
Rops7g01156 902 SMART WD40_4 222 257 IPR001680 GO:0005515
Rops7g01156 902 SMART WD40_4 400 440 IPR001680 GO:0005515
Rops7g01156 902 SMART WD40_4 456 497 IPR001680 GO:0005515
Rops7g01156 902 Pfam Breast carcinoma amplified sequence 3 548 788 IPR022175 -
Rops7g01156 902 SUPERFAMILY WD40 repeat-like 207 500 IPR036322 GO:0005515
Rops7g01156 902 FunFam Breast carcinoma-amplified sequence 3 323 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01156 Rops-Chr7 15489073 15495468 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01156 - - gmx:100784596 1433.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01156 7 15489073 15495468 Rops7g01156 7 15489073 15495468 ECH
Rops7g01156 7 15489073 15495468 Rops3g01654 3 25873119 25880903 PCT