Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00967 ATGGAACCAGCTCTCCGTTATCATAATAATGGCAGCAGTAATGGCAATTTCAACAGTGACTTTGATATTGTTACCTGGTTTGAAGATGTATCCAAGAACGCTGGTTCTGTTCAAACTCAGATACTGTGCCGGATTCTGAAGCAGAACTATGGGGTGGAATATCTGAAGAAATGGTTGGGGAACTACAGTATCCAAGAGATGGATGCATGTGCATTGGAATCTCTTTTCACTTATGCTGTTCCCCTTGCCTCACATGCTGATTTTGAGCCATATATTCAAAGAATTGCTGAGGGAGAAACAAGTCCTTTGCTCACTCAACAACCCATAACCACTCTTTCCTTAAGTTCTGGAACCACAGAGGGAAGGCAGAAGTTCGTGCCTTTTACCCGCCATAGTGCACAAACTACCCTTCAAACTTTCACTTTAGCAGCAGCCTATAGATCAAAGGTTTATCCCACAAGGGAAGGAGGTAGGATTCTTGAATTCATATACAGTAGCAACCAGTTCAAAACAAAAGGAGGCTTAACAGTAGGAACAGCCACAACACACTACTATGCAAGTGAAGAATTCAAAATCAAACAGGAGAAAACAAAGTCATTTACTTGCAGTCCGTACGAAGTTATTTCAGGAGGGGAATATAAACAATCCACGTACTGTCACCTTCTTCTTGGACTCTTCTTCTCTGAACAGGTGGAGTTTATTTCCTCAGCTTTTGTCTACGGCATAGTGCAAGCATTTCGCAGTTTCGAAGAGCTTTGGAGGGACATATGCAATGACATTAGATATGGCACTTTAAGTTCAAGAATCAAATTACCGAAAATGAGAGAGGCTGTTTTGAACATCATATCTTCAAACCTCTGA 861 0.4135 MEPALRYHNNGSSNGNFNSDFDIVTWFEDVSKNAGSVQTQILCRILKQNYGVEYLKKWLGNYSIQEMDACALESLFTYAVPLASHADFEPYIQRIAEGETSPLLTQQPITTLSLSSGTTEGRQKFVPFTRHSAQTTLQTFTLAAAYRSKVYPTREGGRILEFIYSSNQFKTKGGLTVGTATTHYYASEEFKIKQEKTKSFTCSPYEVISGGEYKQSTYCHLLLGLFFSEQVEFISSAFVYGIVQAFRSFEELWRDICNDIRYGTLSSRIKLPKMREAVLNIISSNL* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00967 286 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 23 283 IPR004993 -
Rops7g00967 286 Pfam GH3 auxin-responsive promoter 26 282 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00967 Rops-Chr7 12815863 12817425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00967 22 278 EF-hand Containing Proteins AT1G23160 30.233 3.69e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00967 K14487 - gmx:100814683 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00967 7 12815863 12817425 Rops7g00967 7 12815863 12817425 ECH
Rops7g00967 7 12815863 12817425 Rops3g01381 3 20389490 20394955 PCT