Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00952 ATGAGACGAAGAACAACTGATTTTCGCAGGCAAGCGCGGAAGAGGGTTCCGGATGCGTTTTGGTGGGCATTGTGTTGTGCAGTGGTTCTTCTCTTTATCTATATTCTGAGCAAAGGGAACCAGATTGAGTCTAGACCAGCTTTATCTAAGAGAACTTACAAGCATGATAGGATTATAGAAGGCCTTAATATTACTGAAGAGATGTTAAGTTCTAACTCAGTGACCAGACAACTTAATGATCAGATATCCCTAGCAAAAGCTTTTGTTGTAATTGCAAAAGAAAGTAACAATCTCCAATTTGCTTGGGAACTAAGTGCCCAGATCCGCAATTCACAGATTCTTCTCTCAAATGCAGCTACTAGGCGTGCTCCTTTAACAACCAGGGAATCAGAAACTGCTATTCATGATATGGCATTATTGTTATATCAGGCCCAGCAGCTCCATTATGACAGTGCAACCATGATCATGAGATTCAAAGCAAAAATTCAAGCTCTTGAAGAACAAATGAATTCTGTTAGTGAAAAGAGTTCAAAGTATGGACAAATAGCTGCTGAAGAAGTCCCAAAAAGCCTATACTGTCTTGGTGTCCGGTTGACAACAGAATGGTTCAAAAACCTTAATTTGCAGAAGAAATTGAAGGACAAAAGACGATATGAGACAAAGCTTAAGGATAACAATCTTTACCACTTTTGTGTGTTCTCCGATAACATTCTTGCAACTTCAGTTGTGGTCAATTCCACTGCAATTAATTCTAAAAATCCCAATATGATTGTTTTCCACCTTGTCACTGATGAAATAAATTATGCTGCAATGAAGGCATGGTTTGCCATGAATGATTTCCGTGGGGTGACTGTGGAAGTTCAGAAGTTTGAAGACTTCAGTTGGTTAAATGCTTCATACGTTCCTGTGCTTAAGCAACTTCAAGACTCAGAAATACAAAACTACTACTTTTCTGGCAACAGTGATGATGGCAAGACACCTATCAAGTTCCGCAACCCTAAATATCTATCCATGCTTAACCACCTGAGGTTCTATATCCCTGAAGTTTTTCCTGCATTAAAGAAGGTGGTGTTCCTGGATGATGATATTGTGGTTCAGAAGGATCTCTCTGGTCTTTTTTCCATTGATTTGAATGGGAATGTTAATGGAGCTGTTGAGACATGCATGGAGACATTTCATAGATACCATAAATATTTGAACTATTCTCATCCTCTTATACGTGCACATTTTGACCCTGATGCTTGTGGATGGGCATTTGGGATGAATGTCTTTGATTTGGTTGAGTGGAGGAAAAAGAATGTAACTGGCATCTACCACTACTGGCAGGAAAAGAATGTAGACCGGACATTGTGGAAACTCGGTACTTTGCCACCTGGTTTGTTGACATTTTATGGATTAACTGAGCCCTTGGATCCATCATGGCATGTATTGGGTTTTGGGTATACAAATGTTGATCCTCAGTTAATAGAGAGAGGGGCTGTACTGCACTTCAATGGGAACTCCAAACCATGGTTGAAGATTGGTATTGAAAAGTACAAGCCCCTATGGGAAAAATTTGTTGATTACTCTCATCCTTTATTGCAACAATGCAACTTCCATTGA 1602 0.3958 MRRRTTDFRRQARKRVPDAFWWALCCAVVLLFIYILSKGNQIESRPALSKRTYKHDRIIEGLNITEEMLSSNSVTRQLNDQISLAKAFVVIAKESNNLQFAWELSAQIRNSQILLSNAATRRAPLTTRESETAIHDMALLLYQAQQLHYDSATMIMRFKAKIQALEEQMNSVSEKSSKYGQIAAEEVPKSLYCLGVRLTTEWFKNLNLQKKLKDKRRYETKLKDNNLYHFCVFSDNILATSVVVNSTAINSKNPNMIVFHLVTDEINYAAMKAWFAMNDFRGVTVEVQKFEDFSWLNASYVPVLKQLQDSEIQNYYFSGNSDDGKTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDIVVQKDLSGLFSIDLNGNVNGAVETCMETFHRYHKYLNYSHPLIRAHFDPDACGWAFGMNVFDLVEWRKKNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLDPSWHVLGFGYTNVDPQLIERGAVLHFNGNSKPWLKIGIEKYKPLWEKFVDYSHPLLQQCNFH* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00952 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 66 532 IPR029993 GO:0047262
Rops7g00952 533 Pfam Glycosyl transferase family 8 235 507 IPR002495 GO:0016757
Rops7g00952 533 Coils Coil 155 175 - -
Rops7g00952 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 228 531 IPR029044 -
Rops7g00952 533 CDD GT8_like_1 228 521 - -
Rops7g00952 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 229 526 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00952 Rops-Chr7 12593040 12596714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00952 1 533 Glycosyltransferase AT2G20810 80.410 0.0 889
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00952 K13648 - gmx:100792018 1013.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00952 7 12593040 12596714 Rops7g00952 7 12593040 12596714 ECH
Rops7g00952 7 12593040 12596714 Rops3g01370 3 20201655 20204663 PCT