Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00937 ATGAGCTGTGCAACAAGCAAAGCTTGGATTGTGGCTGCAAGTGTTGGAGCTGTTGAGGCTTTGAAGGACCAAGGTATTTGCAGGTGGAACTATGCTTTAAGACACGCTCAACAACACCTGAAAAACCGTGTTGGATCCTTGTCGCAAGCAAAGAATCTCTCTAGTTCTTCTTCTACTATTGTTGCATGCAAATTAAAGGATGAGAAGGCCAAGAAAGAAGAGGAGTCCTTGAGGACCGTCATGTACTTAAGCTGCTGGGGTCCCAACTGA 270 0.4556 MSCATSKAWIVAASVGAVEALKDQGICRWNYALRHAQQHLKNRVGSLSQAKNLSSSSSTIVACKLKDEKAKKEEESLRTVMYLSCWGPN* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00937 89 PANTHER DUF3774 DOMAIN PROTEIN-RELATED 2 89 IPR022251 -
Rops7g00937 89 Pfam Wound-induced protein 11 88 IPR022251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00937 Rops-Chr7 12476766 12477035 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00937 - - gmx:100305628 133.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00937 7 12476766 12477035 Rops7g00937 7 12476766 12477035 ECH
Rops7g00937 7 12476766 12477035 Rops3g01364 3 20142153 20142416 PCT
Rops3g01365 3 20147004 20147267 Rops7g00937 7 12476766 12477035 PCT