Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01365 ATGAGTTCAACAGTTAGAGCTTGGACAGTGGCAGGTAGTGTTGGGGTTGTGGAGGCCTTGAAGGACCAGGGCATATGCAGGTGGAATTATGCTTTAAAATCAGCACAACAACATGTCAAAAACCATGTTAGATCGTTCTCTCAGGCAAAGAAGCTTTCATCCTCTTCTTCTGCTATGGTCTCCACAAGACTAAAAGAGGAGAAAGCAAAGTCAGAGGAGTCTTTGAGGACTGTCATGTACCTAAGCTGCTGGGGTCCCAATTAG 264 0.4545 MSSTVRAWTVAGSVGVVEALKDQGICRWNYALKSAQQHVKNHVRSFSQAKKLSSSSSAMVSTRLKEEKAKSEESLRTVMYLSCWGPN* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01365 87 Pfam Wound-induced protein 10 86 IPR022251 -
Rops3g01365 87 PANTHER DUF3774 DOMAIN PROTEIN-RELATED 1 87 IPR022251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01365 Rops-Chr3 20147004 20147267 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01365 - - gmx:100818450 132.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01365 3 20147004 20147267 Rops3g01365 3 20147004 20147267 ECH
Rops7g00942 7 12502759 12503031 Rops3g01365 3 20147004 20147267 PCT
Rops3g01365 3 20147004 20147267 Rops7g00937 7 12476766 12477035 PCT