Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00930 ATGGCGGCTCTTACTTCTTTGTCTTTCTCAGCAGTGACCCAATGCTCAGAAAGAAAAGTAACCCTGTCCTCCACTCGCTTCCTTGCTTCCAGTTCTGAGTTCTTTGGATTTCGGACGGATTTCTCGTACAATTATGTGGGTGTTCGAGCTGCCAATTCTGCATCTAAAATGGTTGTTCAATGCATGTCTTCAGTGACAGATGTTCCCACTGTTTCTGAGACAAAGTTAAATTTTCTCAAGACATATAAGCGACCAATTCCTAGTATCTACAACACTGTGCTGCAGGAGCTCATTGTCCAGCAACATTTAATGAGATACAAGACATCATACCGCTATGACCCTGTATTTGCTCTTGGTTTTGTCACTGTTTATGATAAACTCATGGAAGGGTATCCTAGTGATGAGGACCGAGATGCCATCTTCCAAGCTTATATTAAGGCATTGAATGAAGATCCAGAACAATACAGAATAGATGCACAGAAGTTGGAAGAGTGGGCCCGGGCTCAAAACTCAACTTCCCTCGTTGAGTTTTCATCCAAAGGAGGAGAAGTTGAGGGGATTTTAAAGGATATTGCAGAAAGAGCAGGGAGAAAGGGTGAATTCAGTTATAGTCGTTTCTTTGCAGTGGGCCTCTTTCGTCTTCTTGAGTTGGCAAATGCAACGGAACCAACAATTTTAGAAAAGCTTTGTGCGGTTCTGAACATCGACAAAAGAAGTGTTGATAGGGACTTGGATGTGTATCGTGGTCTGCTTTCCAAGTTGGTTCAAGCAAAAGAGCTGCTAAAGGAATATGTTGACAGGGAGAAGAAGAAAAAAGAAGAAAGGGCTGAACCACAGAAGGCTCGTTAG 849 0.4276 MAALTSLSFSAVTQCSERKVTLSSTRFLASSSEFFGFRTDFSYNYVGVRAANSASKMVVQCMSSVTDVPTVSETKLNFLKTYKRPIPSIYNTVLQELIVQQHLMRYKTSYRYDPVFALGFVTVYDKLMEGYPSDEDRDAIFQAYIKALNEDPEQYRIDAQKLEEWARAQNSTSLVEFSSKGGEVEGILKDIAERAGRKGEFSYSRFFAVGLFRLLELANATEPTILEKLCAVLNIDKRSVDRDLDVYRGLLSKLVQAKELLKEYVDREKKKKEERAEPQKAR* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00930 282 Coils Coil 254 277 - -
Rops7g00930 282 Hamap Protein Thf1 [thf1]. 65 273 IPR017499 GO:0010207|GO:0015979
Rops7g00930 282 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 281 IPR017499 GO:0010207|GO:0015979
Rops7g00930 282 NCBIfam photosystem II biogenesis protein Psp29 66 272 IPR017499 GO:0010207|GO:0015979
Rops7g00930 282 Pfam Thylakoid formation protein 70 275 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00930 Rops-Chr7 12431709 12434579 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00930 - - gmx:100814341 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00930 7 12431709 12434579 Rops7g00930 7 12431709 12434579 ECH
Rops7g00930 7 12431709 12434579 Rops3g01362 3 20073847 20077880 PCT